PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Traes_4BL_35C9289F3.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | NAC | ||||||||
Protein Properties | Length: 326aa MW: 34646.2 Da PI: 9.7062 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 44.7 | 4.3e-14 | 74 | 118 | 86 | 128 |
NAM 86 tgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 g+d+++ s+ ++++glkktLvfy+grap+g+ktdWvm+eyrl Traes_4BL_35C9289F3.2 74 XGSDRAIRSTadPKRVIGLKKTLVFYQGRAPRGTKTDWVMNEYRL 118 6889999988667788***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 19.758 | 1 | 138 | IPR003441 | NAC domain |
Pfam | PF02365 | 4.7E-6 | 62 | 118 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 2.62E-18 | 74 | 138 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 326 aa Download sequence Send to blast |
STPRRRSSSA STSPASPSAR SSTSTSSAPS TSTATTPGTF PDWQRSGRGS GTSSYRVTGR 60 RGVAXXXXXX XXXXGSDRAI RSTADPKRVI GLKKTLVFYQ GRAPRGTKTD WVMNEYRLPD 120 TGAPPPQEDT VLCKVYRKAT PLKELEQRAF AMEEMKQRPC GNGGYGYGGA ARACPVPAAG 180 DFYLSPSDDV QENFLTPPSS SSSSVALSGN SSNAPRVAKK EADVGTVTVA STSSLSQAAN 240 APFHLQLPAV NPPCGLQLPA ANHGMPNMSS LQLPAASQGV LDLPSLQLPA ASSHGVFDWL 300 NDPFLTQLRS PWQDQHCMSP YAHLLY |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269|PubMed:26834774}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269|PubMed:26834774}. |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK367376 | 0.0 | AK367376.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, partial cds, clone: NIASHv2055P15. | |||
GenBank | AK367963 | 0.0 | AK367963.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, partial cds, clone: NIASHv2065K10. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020190294.1 | 1e-151 | NAC domain-containing protein 72-like | ||||
Swissprot | Q10S65 | 3e-72 | NAC22_ORYSJ; NAC domain-containing protein 22 | ||||
TrEMBL | A0A3B6IWC8 | 0.0 | A0A3B6IWC8_WHEAT; Uncharacterized protein | ||||
STRING | Traes_4BL_35C9289F3.2 | 0.0 | (Triticum aestivum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1770 | 38 | 105 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G17040.1 | 9e-31 | NAC domain containing protein 36 |
Publications ? help Back to Top | |||
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