PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_4BL_35C9289F3.2
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 326aa    MW: 34646.2 Da    PI: 9.7062
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_4BL_35C9289F3.2genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM44.74.3e-147411886128
                    NAM  86 tgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                             g+d+++ s+   ++++glkktLvfy+grap+g+ktdWvm+eyrl
  Traes_4BL_35C9289F3.2  74 XGSDRAIRSTadPKRVIGLKKTLVFYQGRAPRGTKTDWVMNEYRL 118
                            6889999988667788***************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100519.7581138IPR003441NAC domain
PfamPF023654.7E-662118IPR003441NAC domain
SuperFamilySSF1019412.62E-1874138IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    Send to blast
STPRRRSSSA STSPASPSAR SSTSTSSAPS TSTATTPGTF PDWQRSGRGS GTSSYRVTGR  60
RGVAXXXXXX XXXXGSDRAI RSTADPKRVI GLKKTLVFYQ GRAPRGTKTD WVMNEYRLPD  120
TGAPPPQEDT VLCKVYRKAT PLKELEQRAF AMEEMKQRPC GNGGYGYGGA ARACPVPAAG  180
DFYLSPSDDV QENFLTPPSS SSSSVALSGN SSNAPRVAKK EADVGTVTVA STSSLSQAAN  240
APFHLQLPAV NPPCGLQLPA ANHGMPNMSS LQLPAASQGV LDLPSLQLPA ASSHGVFDWL  300
NDPFLTQLRS PWQDQHCMSP YAHLLY
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269|PubMed:26834774}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269|PubMed:26834774}.
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3673760.0AK367376.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, partial cds, clone: NIASHv2055P15.
GenBankAK3679630.0AK367963.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, partial cds, clone: NIASHv2065K10.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020190294.11e-151NAC domain-containing protein 72-like
SwissprotQ10S653e-72NAC22_ORYSJ; NAC domain-containing protein 22
TrEMBLA0A3B6IWC80.0A0A3B6IWC8_WHEAT; Uncharacterized protein
STRINGTraes_4BL_35C9289F3.20.0(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP177038105
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17040.19e-31NAC domain containing protein 36
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]
  2. Hong Y,Zhang H,Huang L,Li D,Song F
    Overexpression of a Stress-Responsive NAC Transcription Factor Gene ONAC022 Improves Drought and Salt Tolerance in Rice.
    Front Plant Sci, 2016. 7: p. 4
    [PMID:26834774]