PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_4AS_2BDA1260C.3
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family EIL
Protein Properties Length: 651aa    MW: 71976.6 Da    PI: 4.8599
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_4AS_2BDA1260C.3genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3507.94.7e-155794661354
                            XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.....XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
                   EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaa....tgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpv 84 
                            eel++rmw+d+m+lkrlke ++++ +++ a      +  k ++s+eqarrkkmsraQDgiLkYMlk+mevc+aqGfvYgiipekgkpv
  Traes_4AS_2BDA1260C.3  79 EELERRMWRDRMKLKRLKELQQSRGKEQAAGgggaGDGLKPRQSQEQARRKKMSRAQDGILKYMLKMMEVCRAQGFVYGIIPEKGKPV 166
                            8*********************98755555477777788999********************************************** PP

                            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH CS
                   EIN3  85 egasdsLraWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPW 172
                            +gasd+LraWWkekv+fdrngpaai+kyqa+n+++++es+l + +++++hsl+elqDTtlgSLLsalmqhcdppqrrfplekg++pPW
  Traes_4AS_2BDA1260C.3 167 SGASDNLRAWWKEKVRFDRNGPAAIAKYQADNAVPGSESELAS-GTASPHSLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGISPPW 253
                            *****************************************66.******************************************** PP

                            ---S--HHHHHHT--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--X CS
                   EIN3 173 WPtGkelwwgelglskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatv 260
                            WP+G+e+ww+elg++kdqg+ppykkphdlkkawkvsvLtavikhmsp+ie+ir+l+rqsk+lqdkm+ake  ++l+v++qee+++ ++
  Traes_4AS_2BDA1260C.3 254 WPSGDEEWWPELGIPKDQGPPPYKKPHDLKKAWKVSVLTAVIKHMSPDIEKIRRLVRQSKCLQDKMTAKEISTWLAVVKQEEELFMRL 341
                            **************************************************************************************** PP

                            XXX..XX.XXXX..XXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXX............................XXXXXXXXXXXXX CS
                   EIN3 261 sah..ss.slrk..qspkvtlsceqkedvegkkeskikhvqavktta............................gfpvvrkrkkkps 315
                            ++   ++ s     ++ ++++s++ ++dv+  ++ k  ++ ++k ++                            +++ v+kr +  +
  Traes_4AS_2BDA1260C.3 342 HPGvrPPaSAGGiaSAISFNASSS-EYDVDLADDCKGDEAGTHKMAMddptafnlgaailndkflmqapmkeetgDMEYVQKRSAVAA 428
                            ***642242222325555555555.99***5555555555555544456666************************************ PP

                            XXXXXXXX......XXXXXXX.XXXXXXXXXXXXXXXXX CS
                   EIN3 316 esakvsskevsrtcqssqfrgsetelifadknsisqney 354
                            e++ + +++v +tc++ q+++s++  +f d+n++++++y
  Traes_4AS_2BDA1260C.3 429 EPELMLNNRV-YTCNNVQCPHSDYGYGFLDRNARNSHRY 466
                            ******9976.*************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048731.0E-13179335No hitNo description
Gene3DG3DSA:1.10.3180.105.6E-74209343IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167681.23E-60214339IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 651 aa     Download sequence    Send to blast
MMGGGLLMDQ GMAFSGVHNF VDLLQQNGAD KNLGFGSLMP QTSSGDQCVM GEGDLVDPPT  60
NNFPDAGEDD SDDDVDDIEE LERRMWRDRM KLKRLKELQQ SRGKEQAAGG GGAGDGLKPR  120
QSQEQARRKK MSRAQDGILK YMLKMMEVCR AQGFVYGIIP EKGKPVSGAS DNLRAWWKEK  180
VRFDRNGPAA IAKYQADNAV PGSESELASG TASPHSLQEL QDTTLGSLLS ALMQHCDPPQ  240
RRFPLEKGIS PPWWPSGDEE WWPELGIPKD QGPPPYKKPH DLKKAWKVSV LTAVIKHMSP  300
DIEKIRRLVR QSKCLQDKMT AKEISTWLAV VKQEEELFMR LHPGVRPPAS AGGIASAISF  360
NASSSEYDVD LADDCKGDEA GTHKMAMDDP TAFNLGAAIL NDKFLMQAPM KEETGDMEYV  420
QKRSAVAAEP ELMLNNRVYT CNNVQCPHSD YGYGFLDRNA RNSHRYTCKY NDPLPPSAEN  480
KATPPAPPQV FPAAYNQQNH GLNNLDFGLP MDGQRSIAEL MNMYDTTFPA TNKNMGNDDV  540
TIIERPNAIT PVMDEGFFGQ GNGIGGNGDS MFSDVSNMMQ QQQAQQPQQQ QQQQQQAPAQ  600
QQFFIGDDAQ AQFGNQMGSI SGASDFRFGS GFNMSGTVDY PQKNDGPNWY Y
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A5e-742123431132Protein ETHYLENE INSENSITIVE 3
4zds_B5e-742123431132Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor acting as a positive regulator in the ethylene response pathway (PubMed:16786297, PubMed:28829777, PubMed:27701783, PubMed:25995326). Required for the inhibition of root growth by ethylene in etiolated seedlings (PubMed:25995326, PubMed:28829777). Functions upstream of the auxin biosynthetic gene YUCCA8 and directly activates its expression (PubMed:28829777). Functions downstream of the ethylene signaling factor EIN2 in disease resistance against the rice blast fungus (Magnaporthe oryzae) (PubMed:27701783). Binds directly to the promoters of the NADPH oxidases RBOHA and RBOHB, and the jasmonate biosynthetic gene OPR4 to activate their expression during fungal infection (PubMed:27701783). May enhance disease resistance by facilitating reactive oxygen species (ROS) generation and jasmonate biosynthesis with subsequent phytoalexin accumulation during Magnaporthe oryzae infection (PubMed:27701783). Acts as negative regulator of salt tolerance (PubMed:25995326). During salt stress, activates the cation transporter HKT1, which mediates increased sodium uptake in roots, and contributes to sodium accumulation and salt toxicity (PubMed:25995326). Binds directly to the DNA sequence 5'-TGTTACAAATACC-3' in the promoter of the GA20OX2 gene to activate its expression at the transcriptional level during ethylene signaling (PubMed:30002253). Possesses transactivation activity in protoplasts (PubMed:25995326). {ECO:0000269|PubMed:16786297, ECO:0000269|PubMed:25995326, ECO:0000269|PubMed:27701783, ECO:0000269|PubMed:28829777, ECO:0000269|PubMed:30002253}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by infection with the fungal pathogen Magnaporthe oryzae. {ECO:0000269|PubMed:27701783}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKU0308370.0KU030837.1 Triticum aestivum ethylene insensitive 3-like product (TaEIL1) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020198090.10.0ETHYLENE INSENSITIVE 3-like 1 protein
SwissprotQ10M410.0EIL1A_ORYSJ; Protein ETHYLENE-INSENSITIVE 3-like 1a
TrEMBLA0A446QV790.0A0A446QV79_TRITD; Uncharacterized protein
STRINGTraes_4AS_2BDA1260C.30.0(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP63838168
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G27050.11e-160ETHYLENE-INSENSITIVE3-like 1
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]
  3. Yang C, et al.
    MAOHUZI6/ETHYLENE INSENSITIVE3-LIKE1 and ETHYLENE INSENSITIVE3-LIKE2 Regulate Ethylene Response of Roots and Coleoptiles and Negatively Affect Salt Tolerance in Rice.
    Plant Physiol., 2015. 169(1): p. 148-65
    [PMID:25995326]
  4. Yang C, et al.
    Activation of ethylene signaling pathways enhances disease resistance by regulating ROS and phytoalexin production in rice.
    Plant J., 2017. 89(2): p. 338-353
    [PMID:27701783]
  5. Qin H, et al.
    The activation of OsEIL1 on YUC8 transcription and auxin biosynthesis is required for ethylene-inhibited root elongation in rice early seedling development.
    PLoS Genet., 2017. 13(8): p. e1006955
    [PMID:28829777]
  6. Kuroha T, et al.
    Ethylene-gibberellin signaling underlies adaptation of rice to periodic flooding.
    Science, 2018. 361(6398): p. 181-186
    [PMID:30002253]