PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_3AS_6AE36A662.1
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bZIP
Protein Properties Length: 107aa    MW: 12448.2 Da    PI: 11.3852
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_3AS_6AE36A662.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.53.9e-104381246
                           HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1 12 kNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46
                            NR +A+rsR RK+ +i eLe+ v +L++e +aL 
  Traes_3AS_6AE36A662.1  4 ANRQSAQRSRVRKLHYISELERSVTSLQTEVSALS 38
                           6*****************************98886 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.2E-5157IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.726151IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.63E-10151No hitNo description
CDDcd147035.27E-19148No hitNo description
PROSITE patternPS000360115IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1707.5E-13151No hitNo description
PfamPF001706.7E-9248IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 107 aa     Download sequence    Send to blast
RILANRQSAQ RSRVRKLHYI SELERSVTSL QTEVSALSPR VAFLDHQRSL LTLGNSHLKQ  60
RIAALAQDKI FKDGDRHCHP SQLLLFRNFS PATFRIQFET IYNRFAD
Functional Description ? help Back to Top
Source Description
UniProtTranscription regulator. {ECO:0000250}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Down-regulated by dehydration and salt stress. {ECO:0000269|PubMed:18065552}.
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0368213e-87BT036821.1 Zea mays full-length cDNA clone ZM_BFb0141B19 mRNA, complete cds.
GenBankBT0612663e-87BT061266.1 Zea mays full-length cDNA clone ZM_BFb0128B20 mRNA, complete cds.
GenBankKJ7275573e-87KJ727557.1 Zea mays clone pUT5417 bZIP transcription factor (bZIP117) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020191576.19e-42basic leucine zipper 2-like
SwissprotQ5QNI54e-43BZP02_ORYSJ; Basic leucine zipper 2
TrEMBLA0A3B6ECI23e-63A0A3B6ECI2_WHEAT; Uncharacterized protein
STRINGTraes_3AS_6AE36A662.12e-72(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP132238125
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58120.14e-38bZIP family protein
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]