PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Traes_3AL_B1E3D8BA1.1

Organism

Triticum aestivum

Taxonomic ID

4565

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

VOZ

Protein Properties

Length: 381aa MW: 43191.2 Da PI: 4.8495

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Traes_3AL_B1E3D8BA1.1	genome	IWGSC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	422.6	6.1e-130	86	303	1	217
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalne.glpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatak 87 p+p++fl+pkcalwdc+rpaqgse +qdycs++ha+la++e g+pgt+pv+rp+gidlkdg+lfaalsak+qgk+vg+p+cegaat+k Traes_3AL_B1E3D8BA1.1 86 PAPASFLRPKCALWDCPRPAQGSESWQDYCSMYHAELAVKEeGPPGTMPVIRPRGIDLKDGPLFAALSAKIQGKHVGVPVCEGAATTK 173 89***********************************9879***************************************** PP VOZ 88 spwnaaelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyein 175 spwna+elfdl ++ege++rewlffdkprraf+sgnrkqrslpdy+grgwhesrkqvmk+fgglkrsyymdpqpsss+ewhlyeyein Traes_3AL_B1E3D8BA1.1 174 SPWNAPELFDLYIFEGESMREWLFFDKPRRAFDSGNRKQRSLPDYNGRGWHESRKQVMKDFGGLKRSYYMDPQPSSSYEWHLYEYEIN 261 ************************************************************************************ PP VOZ 176 eldalalyrlelklvdekksakgkvskdsladlqkklgrlta 217 + da+alyrle+k++d+kksak+k ++++l ++q++++rl+a Traes_3AL_B1E3D8BA1.1 262 DRDAFALYRLEFKSSDAKKSAKSKFTCSPLIEIQQQMVRLSA 303 **************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 381 aa Download sequence Send to blast
MPFQMYYVNQ ELSVEDFLYD DDYKINLPGS NPEILNNLEG IGHQEYLQFN LPQELPPNAY 60 LDMNNYGQNA GDGFLHMSDL LTTMSPAPAS FLRPKCALWD CPRPAQGSES WQDYCSMYHA 120 ELAVKEEGPP GTMPVIRPRG IDLKDGPLFA ALSAKIQGKH VGVPVCEGAA TTKSPWNAPE 180 LFDLYIFEGE SMREWLFFDK PRRAFDSGNR KQRSLPDYNG RGWHESRKQV MKDFGGLKRS 240 YYMDPQPSSS YEWHLYEYEI NDRDAFALYR LEFKSSDAKK SAKSKFTCSP LIEIQQQMVR 300 LSADGPVENK RTARARTQDV STNIYPVQNN TAQANAPDAY QAASQVDQMT FLNGSVVYGP 360 HLPYGYSTEG GDFYWNSNDG A

Sequence ? help Back to Top

Protein Sequence Length: 381 aa Download sequence Send to blast

MPFQMYYVNQ ELSVEDFLYD DDYKINLPGS NPEILNNLEG IGHQEYLQFN LPQELPPNAY  60
LDMNNYGQNA GDGFLHMSDL LTTMSPAPAS FLRPKCALWD CPRPAQGSES WQDYCSMYHA  120
ELAVKEEGPP GTMPVIRPRG IDLKDGPLFA ALSAKIQGKH VGVPVCEGAA TTKSPWNAPE  180
LFDLYIFEGE SMREWLFFDK PRRAFDSGNR KQRSLPDYNG RGWHESRKQV MKDFGGLKRS  240
YYMDPQPSSS YEWHLYEYEI NDRDAFALYR LEFKSSDAKK SAKSKFTCSP LIEIQQQMVR  300
LSADGPVENK RTARARTQDV STNIYPVQNN TAQANAPDAY QAASQVDQMT FLNGSVVYGP  360
HLPYGYSTEG GDFYWNSNDG A

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AK363185	0.0	AK363185.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2013F10.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020201118.1	0.0	transcription factor VOZ1-like
Swissprot	Q9SGQ0	1e-122	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	A0A446NPL0	0.0	A0A446NPL0_TRITD; Uncharacterized protein
STRING	Traes_3AL_B1E3D8BA1.1	0.0	(Triticum aestivum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2343	38	88

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	1e-115	vascular plant one zinc finger protein

Publications ? help Back to Top
Brenchley R, et al. Analysis of the bread wheat genome using whole-genome shotgun sequencing. Nature, 2012. 491(7426): p. 705-10 [PMID:23192148] Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]