PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Traes_2DL_1B1B2E505.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | NAC | ||||||||
Protein Properties | Length: 208aa MW: 22460.2 Da PI: 8.3659 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 42.2 | 2.6e-13 | 5 | 37 | 96 | 128 |
NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ ++g++ktLvfy+grap+g+ktdW++heyrl Traes_2DL_1B1B2E505.1 5 SRGVIGMRKTLVFYRGRAPNGRKTDWIIHEYRL 37 56789**************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 22.783 | 1 | 58 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 9.29E-17 | 5 | 58 | IPR003441 | NAC domain |
Pfam | PF02365 | 3.3E-5 | 9 | 37 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 208 aa Download sequence Send to blast |
MSSRSRGVIG MRKTLVFYRG RAPNGRKTDW IIHEYRLQTS EHAPTQEEGW VVCRAFQKPA 60 PNQKPSYIFP AYATTPGLGS YYDARPWLHS QVGGDLYYLQ SATGAAGPGG LGFPSQDVKY 120 SSEDLLDSKQ SLFGNIPQLI ESPPPTALLG CGDDAVLQPQ GPGHAVXRPP ATGSGTCGDR 180 HRLELPGQLA VHVTAPRILC HCCITSAP |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020184125.1 | 1e-119 | NAC domain-containing protein 30-like | ||||
TrEMBL | A0A1D5UG65 | 1e-117 | A0A1D5UG65_WHEAT; Uncharacterized protein | ||||
TrEMBL | A0A453DKU4 | 1e-117 | A0A453DKU4_AEGTS; Uncharacterized protein | ||||
TrEMBL | M8D7K0 | 1e-117 | M8D7K0_AEGTA; Uncharacterized protein | ||||
STRING | Traes_2DL_1B1B2E505.1 | 1e-152 | (Triticum aestivum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP2594 | 37 | 91 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G71930.1 | 2e-31 | vascular related NAC-domain protein 7 |
Publications ? help Back to Top | |||
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