PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Traes_2BL_709E67A02.1

Organism

Triticum aestivum

Taxonomic ID

4565

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bZIP

Protein Properties

Length: 176aa MW: 19206.5 Da PI: 8.6472

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Traes_2BL_709E67A02.1	genome	IWGSC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	39.9	9.2e-13	105	149	4	48
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 ++r+rr+ kNRe+A rsR+RK+a + e e + ++L eN++L+++ Traes_2BL_709E67A02.1 105 DRRQRRMVKNRESAARSRARKQAHTNEMELELEQLRRENRMLIQR 149 68****************************************975 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	5.2E-7	102	162	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.243	104	149	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	3.4E-10	106	149	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	9.3E-11	106	149	No hit	No description
CDD	cd14707	2.95E-21	106	152	No hit	No description
SuperFamily	SSF57959	8.75E-11	106	154	No hit	No description
PROSITE pattern	PS00036	0	109	124	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 176 aa Download sequence Send to blast
MEEVWNDMSL CSTPLALQSY HLHSPAAAPY RGAAVYPQDY LAGAPRTPPS HTALTLEFTC 60 PGGTGAANTA TSSGDDPAGC HFGFSASGGG TRRAVVQPAP AVGGDRRQRR MVKNRESAAR 120 SRARKQAHTN EMELELEQLR RENRMLIQRE QDFINVRTYT HGNFSLCHLV TVPVSL

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AK375836	4e-38	AK375836.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv3107H21.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020185453.1	1e-97	bZIP transcription factor 27-like
TrEMBL	A0A446MUY5	1e-128	A0A446MUY5_TRITD; Uncharacterized protein
STRING	Traes_2BL_709E67A02.1	1e-129	(Triticum aestivum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP14602	10	20

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17770.2	2e-10	basic region/leucine zipper motif 27

Publications ? help Back to Top
Brenchley R, et al. Analysis of the bread wheat genome using whole-genome shotgun sequencing. Nature, 2012. 491(7426): p. 705-10 [PMID:23192148]