PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_2AL_FDF9CFC56.1
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 72aa    MW: 8301.65 Da    PI: 9.077
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_2AL_FDF9CFC56.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM47.65.3e-152164248
                    NAM  2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp 48
                            pGfrFhPtd+elv++yL++kv g+      +i+evd+yk++P++Lp
  Traes_2AL_FDF9CFC56.1 21 RPGFRFHPTDQELVSFYLRRKVLGHGGC---FIPEVDLYKLQPHHLP 64
                           79***********************944...4**************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.75E-161767IPR003441NAC domain
PROSITE profilePS5100517.582072IPR003441NAC domain
PfamPF023651.6E-82268IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 72 aa     Download sequence    Send to blast
MAYVTVPAAT AEMDGAFSHL RPGFRFHPTD QELVSFYLRR KVLGHGGCFI PEVDLYKLQP  60
HHLPGIYIYI RR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020160616.12e-23NAC transcription factor 29-like
TrEMBLA0A3B6B8R62e-41A0A3B6B8R6_WHEAT; Uncharacterized protein
STRINGTraes_2AL_FDF9CFC56.16e-47(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP148451121
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G17260.15e-15NAC domain containing protein 86
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]