PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRAES3BF114600150CFD_t1
Common NameTRAES_3BF114600150CFD_c1
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family EIL
Protein Properties Length: 437aa    MW: 48416.3 Da    PI: 4.9909
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRAES3BF114600150CFD_t1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3368.41.3e-112353392318
                              XXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXX......XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
                     EIN3   2 elkkrmwkdqmllkrlkerkkqlledkeaatgakksn......ksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekg 81 
                              +lkkrmwkdqmll rl++r+  +  +  +a+ga++s+       +  + rrk+m raQDg+L++Ml++me+cna+GfvYg i+e g
  TRAES3BF114600150CFD_t1  35 DLKKRMWKDQMLLTRLEGRTGAKGVAPAPAAGASSSSssgqeePPDVRCRRKAMLRAQDGVLRHMLRMMEACNARGFVYGVIDEAG 120
                              9**********************9999999888887777888788889************************************** PP

                              XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT- CS
                     EIN3  82 kpvegasdsLraWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekg 167
                              +p++g+sdsLr+WWke+v+fdr+gp+ ++          ges    +  s+ h+l+++qD+tlgS+Lsal+qhc+ppqr+fple+g
  TRAES3BF114600150CFD_t1 121 EPMSGSSDSLRGWWKENVSFDRAGPMGLAGP-------MGESPI--ALASSLHRLQDIQDSTLGSVLSALIQHCEPPQRSFPLERG 197
                              *****************************99.......334444..468999********************************** PP

                              -HHHH---S--HHHHHHT.--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTT CS
                     EIN3 168 vepPWWPtGkelwwgelg.lskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnq 252
                              ++pPWWPtG+e wwg++g ++++qg ppy+kphdlkkawk+s+L+avikhmsp+++++r+l++qsk+lq+kmsakes ++++vl+q
  TRAES3BF114600150CFD_t1 198 LAPPWWPTGHEPWWGTQGeMQAHQGVPPYRKPHDLKKAWKISLLSAVIKHMSPRFDQMRKLVWQSKRLQQKMSAKESETWSKVLRQ 283
                              ************************************************************************************** PP

                              TTT-S--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXX CS
                     EIN3 253 eekecatvsahssslrkqspkvtlsceqkedvegkkeskikhvqavkttagfpvvrkrkkkpsesa 318
                              ee++  +++++      + + +  ++e++e+ e     k k+v +++  +g++ v +   + ++++
  TRAES3BF114600150CFD_t1 284 EEALSSRLKSSL-----RITPFDQEEEEEEEEE----VKKKKVGKERDDDGLESVVRGA-QDKRKR 339
                              **9775544433.....2333333333333333....3335566666666555443332.112222 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048731.2E-11335285No hitNo description
Gene3DG3DSA:1.10.3180.101.9E-64160294IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167688.63E-57163287IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 437 aa     Download sequence    Send to blast
MEHGDGPGGP DPGGQQREEE ISDSESGSES LEISDLKKRM WKDQMLLTRL EGRTGAKGVA  60
PAPAAGASSS SSSGQEEPPD VRCRRKAMLR AQDGVLRHML RMMEACNARG FVYGVIDEAG  120
EPMSGSSDSL RGWWKENVSF DRAGPMGLAG PMGESPIALA SSLHRLQDIQ DSTLGSVLSA  180
LIQHCEPPQR SFPLERGLAP PWWPTGHEPW WGTQGEMQAH QGVPPYRKPH DLKKAWKISL  240
LSAVIKHMSP RFDQMRKLVW QSKRLQQKMS AKESETWSKV LRQEEALSSR LKSSLRITPF  300
DQEEEEEEEE EVKKKKVGKE RDDDGLESVV RGAQDKRKRE ISRTGSSGGS GSEADHNAPD  360
QLAAAITEES RSPIDELMKL YYGCMQGVES YGDREKDDLT PMHSVVLGNI DEVAQDVLFD  420
IIGSCPEIDD VLRLMGE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A1e-491612911130Protein ETHYLENE INSENSITIVE 3
4zds_B1e-491612911130Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor that may be involved in the ethylene response pathway. {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG6703060.0HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020197833.10.0ETHYLENE INSENSITIVE 3-like 5 protein isoform X1
RefseqXP_020197834.10.0ETHYLENE INSENSITIVE 3-like 5 protein isoform X2
RefseqXP_020197835.10.0ETHYLENE INSENSITIVE 3-like 5 protein isoform X2
SwissprotQ9FJQ51e-92EIL5_ARATH; ETHYLENE INSENSITIVE 3-like 5 protein
TrEMBLA0A077RX040.0A0A077RX04_WHEAT; Uncharacterized protein
STRINGEMT099030.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP63838168
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65100.13e-90EIL family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]