PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Sevir.6G212300.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family | EIL | ||||||||
Protein Properties | Length: 620aa MW: 68229.4 Da PI: 6.1405 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 416.4 | 3.1e-127 | 38 | 374 | 1 | 334 |
XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsL 91 eel +rmwkd+++lkr+ker+++l ++ +++++k++k+++qa rkkm+raQDgiLkYM+k mevcna+GfvYgiip+kgkpv+gasd++ Sevir.6G212300.1.p 38 EELARRMWKDKIKLKRIKERQQKLALQRL-ELEKSKTKKISDQALRKKMARAQDGILKYMIKLMEVCNARGFVYGIIPDKGKPVSGASDNI 127 8*********************9775555.5************************************************************ PP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHH CS EIN3 92 raWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwg 182 raWWkekv+fd+ngpaai+ky+ +n ils+++s+ + + +hsl++lqD tlgSLLsalm hc+p+qrr+pl+kgv+pPWWP+G+e+ww+ Sevir.6G212300.1.p 128 RAWWKEKVKFDKNGPAAITKYEVENSILSNAKSN---GAKDQHSLMDLQDGTLGSLLSALMLHCSPQQRRYPLDKGVPPPWWPSGNEAWWS 215 *****************************99999...88**************************************************** PP HHT--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXXXXXXXXXX CS EIN3 183 elglskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahssslrkqspk 273 +lgl+k ppykkphdlkk+wkv+vLt vikhm+p++++ir+++r+sk+lqdkm+ake ++l vl++eek ++++ s++ +++ Sevir.6G212300.1.p 216 SLGLPKGEA-PPYKKPHDLKKVWKVGVLTGVIKHMAPNFDKIRNHVRKSKCLQDKMTAKENLIWLGVLQREEKSVNSFGNALSEI--TRNE 303 ******998.9**************************************************************998888775443..6788 PP XXXXXXXXXXXX.XXXXXX.XXXXXXXXXX...........XXXXXXXXXXXXXXXXXXXXX......XXXXX CS EIN3 274 vtlsceqkedve.gkkeskikhvqavktta...........gfpvvrkrkkkpsesakvsskevsrtcqssqf 334 ++s+++++dv+ +++ ++++++++ + ++ +++r++ +s+++ vs++++ + +++q Sevir.6G212300.1.p 304 DIYSSSDEYDVDrL-EQPPHSTSSKEDEDTqpvlqirgkktSTRENKRRRRDKSSNQVVSKEDM-TKSRQQQS 374 8999999*****53.4444344444443334777776665444444444444444444444433.44444444 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04873 | 1.8E-124 | 38 | 286 | No hit | No description |
Gene3D | G3DSA:1.10.3180.10 | 3.6E-67 | 160 | 291 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
SuperFamily | SSF116768 | 5.49E-59 | 166 | 288 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 620 aa Download sequence Send to blast |
MDHLAILASE VDDASDFDVD GINSLSENDV SDEEIDAEEL ARRMWKDKIK LKRIKERQQK 60 LALQRLELEK SKTKKISDQA LRKKMARAQD GILKYMIKLM EVCNARGFVY GIIPDKGKPV 120 SGASDNIRAW WKEKVKFDKN GPAAITKYEV ENSILSNAKS NGAKDQHSLM DLQDGTLGSL 180 LSALMLHCSP QQRRYPLDKG VPPPWWPSGN EAWWSSLGLP KGEAPPYKKP HDLKKVWKVG 240 VLTGVIKHMA PNFDKIRNHV RKSKCLQDKM TAKENLIWLG VLQREEKSVN SFGNALSEIT 300 RNEDIYSSSD EYDVDRLEQP PHSTSSKEDE DTQPVLQIRG KKTSTRENKR RRRDKSSNQV 360 VSKEDMTKSR QQQSPSGHPP VAEDEVEVTQ RNDNPPEIVS SAIGDVNIFD PLDVVGITNQ 420 PACDPIPTYG SLQQHGDYQG NFLSPGAALN NYNSNQAASA ALNKHNNNQA ASAAQSSTYL 480 SDPPLACEGS DIANSWSGHS FRQDVGHGPI GFNPSAIVQA SSMQQQQPLP MDHHVPIMGT 540 GALSGNGSYS YPAAGSGHSG TVASKAEQLM DDPFFGEATD KFAGNSFGGL PLSLIPISSP 600 IPYLDELLDD DDLMQYLGT* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1wij_A | 1e-59 | 166 | 293 | 9 | 136 | ETHYLENE-INSENSITIVE3-like 3 protein |
Search in ModeBase |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 349 | 354 | RRRRDK |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor that may be involved in the ethylene response pathway. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Sevir.6G212300.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004973869.1 | 0.0 | ETHYLENE INSENSITIVE 3-like 3 protein | ||||
Swissprot | O23116 | 1e-132 | EIL3_ARATH; ETHYLENE INSENSITIVE 3-like 3 protein | ||||
TrEMBL | K3YGQ8 | 0.0 | K3YGQ8_SETIT; Uncharacterized protein | ||||
STRING | Si013426m | 0.0 | (Setaria italica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP3720 | 37 | 79 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G73730.1 | 1e-134 | ETHYLENE-INSENSITIVE3-like 3 |
Link Out ? help Back to Top | |
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Phytozome | Sevir.6G212300.1.p |
Publications ? help Back to Top | |||
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