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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sevir.3G139100.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family |
GRAS |
Protein Properties |
Length: 495aa MW: 52729.8 Da PI: 5.8495 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sevir.3G139100.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 349 | 7.4e-107 | 78 | 454 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlsel.aspdg.dpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsP 89
lv+lL++c a+++gd ++a+ La+ + + a + + m R+a++f+ ALa+rl+ ++ + pp + ++ ++ ++ f+++ P
Sevir.3G139100.1.p 78 LVHLLVTCTGAIQAGDYSAAHGNLAEARSIlAVIATsTGMGRVATHFADALAQRLFPAYPNAA---PPAPP----HTATAEQYSHFYDAGP 161
68**************************99755555599*****************9333333...33333....3455666888****** PP
GRAS 90 ilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnv 180
+l+f++ taNqaIl+a+eg++rvH++Df ++qGlQWp+L++aL++R++gpp+lRiTg+g++ +g +el+e+g rLa+fA++lgvpf f+
Sevir.3G139100.1.p 162 YLNFAYSTANQAILDAFEGCDRVHVVDFALMQGLQWPSLIHALSKREGGPPRLRITGIGPHPTGAGDELREVGIRLAEFARSLGVPFCFRG 252
************************************************************9999*************************** PP
GRAS 181 lvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsles...erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalf 268
+ +++l+ l+ ++L++ pgEala n+++qlhrll ++ + + ++d +L+lv +l+P++++vveqeadhn++++lerf++al +y+a+f
Sevir.3G139100.1.p 253 VCVDQLDGLSKWMLKIVPGEALAFNSIMQLHRLLVDPDADPAvpaPIDILLDLVTELQPRIFTVVEQEADHNRPPLLERFTNALFHYAAMF 343
*********************************96655544444499******************************************** PP
GRAS 269 dsl.eak.lpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklll.rkvk..sdgyrveee 354
ds+ +a+ ++ + ++ +++l+ ei ++v+ eg++r erhe l++Wrerl +aG+++v ++ +++ a + l + ++ +dgy++ e
Sevir.3G139100.1.p 344 DSMvAAGnHAAGGSSTCSLAEAYLRSEIFDIVCGEGSARAERHELLGRWRERLARAGLTQVLFGPNEVRLATAQLiSATSfsGDGYSILEC 434
***74441444448889999999*****************************************999876665441333334899****** PP
GRAS 355 sgslvlgWkdrpLvsvSaWr 374
gsl l W+drpL++++aWr
Sevir.3G139100.1.p 435 AGSLALAWHDRPLYAATAWR 454
*******************8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 495 aa
Download sequence Send
to blast |
MGLIPFSWLP MEPAAAATFT GGIPPPFPAA ADNGAAYCID PTTLLASLLP PGRQPAVPAA 60 AEAARRRQEE EEAAAIRLVH LLVTCTGAIQ AGDYSAAHGN LAEARSILAV IATSTGMGRV 120 ATHFADALAQ RLFPAYPNAA PPAPPHTATA EQYSHFYDAG PYLNFAYSTA NQAILDAFEG 180 CDRVHVVDFA LMQGLQWPSL IHALSKREGG PPRLRITGIG PHPTGAGDEL REVGIRLAEF 240 ARSLGVPFCF RGVCVDQLDG LSKWMLKIVP GEALAFNSIM QLHRLLVDPD ADPAVPAPID 300 ILLDLVTELQ PRIFTVVEQE ADHNRPPLLE RFTNALFHYA AMFDSMVAAG NHAAGGSSTC 360 SLAEAYLRSE IFDIVCGEGS ARAERHELLG RWRERLARAG LTQVLFGPNE VRLATAQLIS 420 ATSFSGDGYS ILECAGSLAL AWHDRPLYAA TAWRAAGGGS AASAVAHDEW RDDGRRRARN 480 GGRESYGFGN LAIV*
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