PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PGSC0003DMP400029619 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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Family | bZIP | ||||||||
Protein Properties | Length: 362aa MW: 41009.9 Da PI: 7.9735 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 33.7 | 7.9e-11 | 77 | 117 | 3 | 43 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNk 43 ++k++rr+++NReAAr+sR RKka++++Le+ +L + + PGSC0003DMP400029619 77 SDKVQRRLAQNREAARKSRMRKKAYVQQLEKSNLKLAQLEM 117 68****************************86655555544 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 7.4E-5 | 75 | 138 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.105 | 77 | 121 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.4E-7 | 78 | 117 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.44E-7 | 79 | 115 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 5.2E-8 | 79 | 122 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 82 | 97 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 2.4E-28 | 166 | 238 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0042742 | Biological Process | defense response to bacterium | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 362 aa Download sequence Send to blast |
MSSTSTQFAP TRRMGIFEPF HHMSMWEDAF RGDIMPSVSA CMVTPANDRA DDKSGYTSSD 60 QLIPSGSEDN QAGKSVSDKV QRRLAQNREA ARKSRMRKKA YVQQLEKSNL KLAQLEMELE 120 RARQQGLYIL GSNGNMGLSS TINPGIAAFE MEYSLWVEEQ QKKNVELRNI LQSHVSEMEL 180 QLLVETVLNH YYNLFRMKVD AAKADVFYLI SGMWRTSVER FFLWIGGFKP SELINIVMPQ 240 LEPLSDQQIV KICNLRHCCQ QAEDALTQGM DKLQQTLAQN ILTMTTGMGS YSSQMVSSME 300 KLEALESFVT QADHLRQQTL QQLSLVLTTR QSARGLLAFG EYLQRLRALS SLWAARPREP 360 T* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1 (By similarity). {ECO:0000250, ECO:0000269|PubMed:12953119}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00247 | DAP | Transfer from AT1G77920 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | PGSC0003DMP400029619 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_006360289.1 | 0.0 | PREDICTED: transcription factor TGA7 | ||||
Refseq | XP_015170248.1 | 0.0 | PREDICTED: transcription factor TGA7 | ||||
Swissprot | Q93ZE2 | 1e-151 | TGA7_ARATH; Transcription factor TGA7 | ||||
TrEMBL | M1BF04 | 0.0 | M1BF04_SOLTU; Uncharacterized protein | ||||
STRING | PGSC0003DMT400043651 | 0.0 | (Solanum tuberosum) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G65210.5 | 1e-141 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | PGSC0003DMP400029619 |
Publications ? help Back to Top | |||
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