PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PGSC0003DMP400026158 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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Family | bZIP | ||||||||
Protein Properties | Length: 211aa MW: 23326.5 Da PI: 4.9479 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 53.2 | 6.6e-17 | 36 | 91 | 3 | 58 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 ++kr rr ++NRe+ArrsR+RK+a ++ Le v+++ +eN++L k+l +++++ PGSC0003DMP400026158 36 DIKRIRRQASNRESARRSRRRKQAHLADLESQVDQFRGENESLFKQLADATQQYKD 91 79******************************************887777777654 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 7.6E-13 | 31 | 90 | No hit | No description |
SMART | SM00338 | 8.1E-17 | 34 | 98 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.036 | 36 | 88 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 4.92E-12 | 37 | 89 | No hit | No description |
Pfam | PF00170 | 1.9E-14 | 37 | 91 | IPR004827 | Basic-leucine zipper domain |
PROSITE pattern | PS00036 | 0 | 41 | 56 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0071333 | Biological Process | cellular response to glucose stimulus | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0042803 | Molecular Function | protein homodimerization activity | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0046982 | Molecular Function | protein heterodimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 211 aa Download sequence Send to blast |
MRDNQAMGAT SGSYQSDDDD LEGDVDPCEE STDPSDIKRI RRQASNRESA RRSRRRKQAH 60 LADLESQVDQ FRGENESLFK QLADATQQYK DSLTNNRVLK SNVEELRAKV KLAEVRAARG 120 SVSSSLNHLF LNYLTPPQSL GTNNNNNNIT MCRLDNVSPT INVPGEDSWG GISGQNPMIG 180 VENVNAFDRN LNNGAMSDNA SCISEVWSFK * |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 50 | 57 | RRSRRRKQ |
2 | 52 | 57 | SRRRKQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor that binds to the DNA specific sequence 5'-TGAGTCA-3' found in seed storage protein gene promoters. {ECO:0000269|PubMed:11133985}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | PGSC0003DMP400026158 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | HG975447 | 1e-117 | HG975447.1 Solanum pennellii chromosome ch08, complete genome. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_006357031.2 | 1e-152 | PREDICTED: basic leucine zipper 9 | ||||
Swissprot | Q6H500 | 2e-52 | RSBZ4_ORYSJ; bZIP transcription factor RISBZ4 | ||||
TrEMBL | M1B6Y8 | 1e-153 | M1B6Y8_SOLTU; Uncharacterized protein | ||||
STRING | PGSC0003DMT400038493 | 1e-152 | (Solanum tuberosum) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G24800.1 | 1e-38 | basic leucine zipper 9 |
Link Out ? help Back to Top | |
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Phytozome | PGSC0003DMP400026158 |
Publications ? help Back to Top | |||
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