PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PGSC0003DMP400012722 | ||||||||
Common Name | LOC102579732 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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Family | bZIP | ||||||||
Protein Properties | Length: 823aa MW: 88180.5 Da PI: 6.2916 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 39.8 | 9.9e-13 | 338 | 398 | 2 | 62 |
XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 ++ k+ r+++NRe+A sRqRKk ++eeLe+kv + + ++L +++ e +lk++ PGSC0003DMP400012722 338 EDEKKMARLIRNRESAHLSRQRKKHYVEELEDKVRIMHSTIQDLNAKISYVMAENVTLKTQ 398 5679999*************************************99999888888777765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 7.8E-14 | 337 | 401 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.749 | 339 | 399 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 2.2E-11 | 340 | 398 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 3.44E-12 | 341 | 399 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 3.8E-15 | 341 | 399 | No hit | No description |
CDD | cd14704 | 7.89E-18 | 342 | 392 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0042538 | Biological Process | hyperosmotic salinity response | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005783 | Cellular Component | endoplasmic reticulum | ||||
GO:0016021 | Cellular Component | integral component of membrane | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 823 aa Download sequence Send to blast |
MSDKPPPVDD NLTGEFDGLA VPPLDHTFFA QHITEADQGI GDDFPMEFRS VDFSIDDLDF 60 EVSFDDLFPN PTDGDAFQKP NCLADCIGSE PGQMDFGQHG SQLIGSFDDA SGIFKSTSGD 120 SLEEAPGSNS VQMDPNCFGQ SGSQLIGNSV DSSTNVKLKS EEMSDFAGNQ AAGGVMVMDT 180 SSPELGQSSS SSRLSNEVSP SLHQLSTDVS GYLNVPSPES NGSNHDVSRE SSNDKKGLSD 240 AKVLNCHSPE SQGSGNCGGL NYLSDSNKSV HSSPNLGSNL VKGGVVEHKF KLEGVGANIS 300 NCSSSLLKRK KGGEDLNNAS KHQKSSMFSL SDNVNNDEDE KKMARLIRNR ESAHLSRQRK 360 KHYVEELEDK VRIMHSTIQD LNAKISYVMA ENVTLKTQLG GTGVPPQVQP PPGMYPHPSM 420 VYPWMSYPPP YMMKPQGSQV PLVPIPKLKP QAAAPAPKSS KKGEKKKSEV KTKKVASISL 480 LGVLFFMLLF GGLVPLLNVR YGGTREPFMG GFSIGSGFYE KHHGRVLVVD GPVNGTGYSG 540 KYSEKDYSSH CGRSGHSEGN QQNTYNAADE FVHVGNGSNP LAASLYVPRN DKLIKIDGNL 600 IIQSVLASEK AMASHGGSDK NKRETGLAVP GDLAPAIPGS HPRLYRSSAM GQRALGTVEN 660 ENAKSTMQQW YLEGVAGPLM SSGMCTEVFQ FDVSSSAPGA IVRATNARNI STEERQNATR 720 IHRNRRILSG TPVSLSKPSH NFSEEQTGTT GKQENFTGNK SLSSMVVSVL VDPREAGDTD 780 GDGIMGPKSL SRIFVVVLID SVKYVTYSCM LPFIGATPLV TT* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 714 | 725 | RQNATRIHRNRR |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator involved in salt and osmotic stress responses. Functions as a stress sensor and transducer in a signaling pathway that resembles an ER stress response. Following salt stress, BZIP17 is cleaved by SBT6.1 (S1P) and S2P at the C-terminus and the N-terminal bZIP component is translocated to the nucleus, where it activates the expression of salt stress response genes (PubMed:17662035). Functions as a stress sensor and transducer in ER stress signaling pathway. ER stress induces proteolysis of BZIP17 by SBT6.1 (S1P) and S2P, and the N-terminal bZIP component is translocated to the nucleus, where it activates the expression and production of ER chaperones, as well as protein involved in brassinosteroid (BR) signaling, which is required for stress acclimation and growth (PubMed:20876872). {ECO:0000269|PubMed:17662035, ECO:0000269|PubMed:20876872}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | PGSC0003DMP400012722 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | HG975449 | 0.0 | HG975449.1 Solanum pennellii chromosome ch10, complete genome. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_006364780.1 | 0.0 | PREDICTED: bZIP transcription factor 17 | ||||
Swissprot | O22208 | 1e-138 | BZP17_ARATH; bZIP transcription factor 17 | ||||
TrEMBL | M1AAQ5 | 0.0 | M1AAQ5_SOLTU; Uncharacterized protein | ||||
STRING | PGSC0003DMT400018486 | 0.0 | (Solanum tuberosum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA3029 | 24 | 50 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40950.1 | 1e-112 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | PGSC0003DMP400012722 |
Entrez Gene | 102579732 |