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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
SapurV1A.1131s0040.1.p |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
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| Family |
GRAS |
| Protein Properties |
Length: 594aa MW: 65187.5 Da PI: 4.6799 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| SapurV1A.1131s0040.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 354.2 | 2e-108 | 226 | 593 | 3 | 374 |
GRAS 3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsP 89
++L+ecA+ v+s+ + a + L + ++ +s++g p++R+ +yf+e+L +r+a + k + ++++s+e + ++k++++++P
SapurV1A.1131s0040.1.p 226 KALVECAQLVESKADQ-AVKSLVKFKDSVSENGGPVERVGFYFAEGLCRRVAARELDVLK-----NFDQTTSEEFTLSYKALNDACP 306
79********996655.55667789***************************94444443.....33333478999*********** PP
GRAS 90 ilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesg..skeeleetgerLakfAeelg 173
+ kf+hltaNqaIlea+e+++++Hi+Df+i qG+QW+aLlqaLa+R++g+p ++Ri g+ +p g + +l +tg+rL +fA+ l+
SapurV1A.1131s0040.1.p 307 YSKFAHLTANQAILEATEKASKIHIVDFGIVQGVQWAALLQALATRSAGKPvRIRISGIPAPVLGknPAASLLATGNRLLDFAKLLD 393
***********************************************88777*********9988889999**************** PP
GRAS 174 vpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflea 260
++fef++ + + +++l+ + +rv+p+E+laVn++lql++lldes + + Lk+ ksl+Pk+v++ e e+ +n+ +l+rf +a
SapurV1A.1131s0040.1.p 394 LNFEFEP-ILTPIQELNESCFRVEPDEVLAVNFMLQLYNLLDESPVAVE---TALKMAKSLNPKIVTLGEYEVCLNRVGYLTRFKNA 476
*******.799******************************99988888...9********************************** PP
GRAS 261 leyysalfdsleaklpreseerikvErellgreivnvvacegae.rrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk. 345
l+yy+a+f+sle +l+r+s er vEr llg +i++vv e+ rrer+e + +W + +e++GF++v+ls++a++qak ll +++
SapurV1A.1131s0040.1.p 477 LRYYTAVFESLEPNLSRDSPERLRVERLLLGHRISSVVGPEEPGvRRERMEDKDQWGALMESSGFESVSLSHYATSQAKILLWNYNy 563
****************************************99988*****************************************9 PP
GRAS 346 sdgyrveeesgslv.lgWkdrpLvsvSaWr 374
s y++++++ ++ l W+d pL++vS+Wr
SapurV1A.1131s0040.1.p 564 SALYSIDDSQPGFLtLAWNDVPLLTVSSWR 593
999****99877777**************8 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 594 aa
Download sequence Send
to blast |
MAYMCADSGN LMAIAQQVIK QKQQQEQQQQ QSHHHNQQQQ LLGLNPFSLN PWPTNIMSVN 60
PNLGYGLSGP AAFSDPFQNG QDTGDPPGFN FSNMEQNHSS GFRLPYFTGA GGEFDSDEWM 120
DSLMNGGDST DSSNLPSGCD AWQNSTDFGM YTSDPFNTVP SRLAVGCSPP SDLNGVISNS 180
LWAAPSPPEE IKPTTSPPPL PLPTVKNEVV GGSKEIAQLS SSPVLKALVE CAQLVESKAD 240
QAVKSLVKFK DSVSENGGPV ERVGFYFAEG LCRRVAAREL DVLKNFDQTT SEEFTLSYKA 300
LNDACPYSKF AHLTANQAIL EATEKASKIH IVDFGIVQGV QWAALLQALA TRSAGKPVRI 360
RISGIPAPVL GKNPAASLLA TGNRLLDFAK LLDLNFEFEP ILTPIQELNE SCFRVEPDEV 420
LAVNFMLQLY NLLDESPVAV ETALKMAKSL NPKIVTLGEY EVCLNRVGYL TRFKNALRYY 480
TAVFESLEPN LSRDSPERLR VERLLLGHRI SSVVGPEEPG VRRERMEDKD QWGALMESSG 540
FESVSLSHYA TSQAKILLWN YNYSALYSID DSQPGFLTLA WNDVPLLTVS SWR*
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| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor involved in plant development (By similarity). Involved in environmental abiotic stress resistance. May increase the expression of stress-responsive genes (PubMed:20616154). Binds DNA in vitro (By similarity). {ECO:0000250|UniProtKB:Q53K16, ECO:0000250|UniProtKB:Q9SCR0, ECO:0000269|PubMed:20616154}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Up-regulated by drought and high salt stresses, and down-regulated by gibberellic acid (GA) treatment, but not by plant hormone abscisic acid (ABA) application in leaves. Under the salt treatment, expression is induced quickly, and it peaks at 3 hours. Under the drought treatment, the expression is not induced immediately, but reaches its maximum at 3 hours. Under the GA treatment, the expression becomes weaker within 5 hours. {ECO:0000269|PubMed:20616154}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | KJ511863 | 0.0 | KJ511863.1 Populus euphratica GRAS/SCL transcription factor (SCL7) mRNA, complete cds. |
