PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0871s0110.1.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family NAC
Protein Properties Length: 419aa    MW: 47312.6 Da    PI: 4.6246
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0871s0110.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM49.61.3e-15161482128
                     NAM   2 ppGfrFhPtdeelvveyLkkkvegkk.leleev.ikevdiykv...ePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgy 82 
                             p GfrF+P d+elv +yL +k+++ + +++++v ++++++y +   +Pw++  +  k + ++++fF++  kk +   r+      + 
  SapurV1A.0871s0110.1.p  16 PEGFRFRPDDQELVRFYLYPKITNPNiFTTFNVpVRDCHLYGSqarDPWQIWdSFPKRHGEDLFFFTQLTKKGRYVVRQIS-GGPAK 101
                             89**********************99756667779999988765559****734445567789999999887654444333.34567 PP

                     NAM  83 Wkatgkdkevlsk...kgelvglkktLvfykgrapkgektdWvmheyrl 128
                             W++  kd +  ++   + +++ ++k++++   + ++ ++ +W++ ey+l
  SapurV1A.0871s0110.1.p 102 WHQDHKDLPFDVSidpNCKVTAIRKVFTYD--NPKSDHNGSWFLFEYSL 148
                             ******9988777777888899***99998..45555699*******97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.44E-179163IPR003441NAC domain
PROSITE profilePS5100521.32515163IPR003441NAC domain
PfamPF023656.1E-1216148IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 419 aa     Download sequence    Send to blast
MAMSSQNQET QTLEIPEGFR FRPDDQELVR FYLYPKITNP NIFTTFNVPV RDCHLYGSQA  60
RDPWQIWDSF PKRHGEDLFF FTQLTKKGRY VVRQISGGPA KWHQDHKDLP FDVSIDPNCK  120
VTAIRKVFTY DNPKSDHNGS WFLFEYSLPS LSQLTVLCQL RKKEVHNPET VNLQQSTTKK  180
RKRVLQQSTT KKRKRVVDIE SVDDARNTIL QKPMIDGLDH QQEHIMGFDG LVDIASQVEN  240
QQQHLQLEPL FDNGLDFGYF ESFSCEDVQD FGIFLMATDS GSVSTSNVAS PTVSTFNPAE  300
NSQSVEVVSV DGDAALALDH DFCLQLLDSS GSCDEADGFP ATKATAQASA YWTQATPNLD  360
ESFTSDAVDY YLEHGVCDSS PANWSGSFSQ MLLEEHTCLI QEKEIQMVSN PSLVERNS*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1180194RKRVLQQSTTKKRKR
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0871s0110.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010999305.11e-164PREDICTED: NAC transcription factor 29-like
TrEMBLA0A2K1X3T40.0A0A2K1X3T4_POPTR; Uncharacterized protein
STRINGPOPTR_0017s08490.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF13633523
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62380.12e-08NAC-domain protein 101