PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SapurV1A.0781s0030.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
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Family | bHLH | ||||||||
Protein Properties | Length: 269aa MW: 30299.1 Da PI: 7.9601 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 30 | 9.5e-10 | 160 | 207 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+++Er RR++iN+++ L++++P + +k + a +Le+ ++Y++sLq SapurV1A.0781s0030.1.p 160 SHSIAERIRREKINTKLRCLQDIVPGC----HKSMGMAVMLEEIINYVHSLQ 207 8*************************9....788*****************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00083 | 1.00E-9 | 154 | 211 | No hit | No description |
SuperFamily | SSF47459 | 1.7E-16 | 154 | 222 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 7.8E-16 | 156 | 218 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 14.869 | 156 | 206 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 2.8E-7 | 160 | 207 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 4.9E-9 | 162 | 212 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 269 aa Download sequence Send to blast |
MAEFAEYLQR LRASQPLTDQ MMDMNMEMLK HLPELHPSIL ENFGITHDFS AGSFLAYQQP 60 EFPAAYSHNN LSSTSDNLST APPVHTVTLN QNIFHESKKR KAVEQSTRSS KNVSPTASIN 120 ITEKKNNSGR CKKGKNKEKE GDKAEEVIHV RAKRGQATDS HSIAERIRRE KINTKLRCLQ 180 DIVPGCHKSM GMAVMLEEII NYVHSLQNQV EFLSMELAAA SCSNDLKNIT ESSKKAQGTN 240 SNEDAQETQK WLRERYGEIT CFHSTWSI* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Positive regulator of brassinosteroid signaling. {ECO:0000269|PubMed:12454087}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | SapurV1A.0781s0030.1.p |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by brassinosteroid, auxin, ethylene and cytokinin, and repressed by abscisic acid. Insensitive to gibberellic acid. {ECO:0000269|PubMed:12454087}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024454935.1 | 1e-162 | transcription factor BEE 1 | ||||
Swissprot | Q8GZ13 | 8e-45 | BEE1_ARATH; Transcription factor BEE 1 | ||||
TrEMBL | A0A2K2ASF7 | 1e-161 | A0A2K2ASF7_POPTR; Uncharacterized protein | ||||
STRING | POPTR_0004s09850.1 | 1e-157 | (Populus trichocarpa) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF14412 | 12 | 18 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G18400.1 | 2e-46 | BR enhanced expression 1 |
Link Out ? help Back to Top | |
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Phytozome | SapurV1A.0781s0030.1.p |
Publications ? help Back to Top | |||
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