PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0627s0010.1.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family ERF
Protein Properties Length: 269aa    MW: 29780.4 Da    PI: 7.4627
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0627s0010.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.21e-18131180255
                     AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                              y+GVr+++ +g+W+AeIrdp     r +r++lg+f tae Aa+a+++a+  ++g
  SapurV1A.0627s0010.1.p 131 NYRGVRQRP-WGKWAAEIRDP----LRaARVWLGTFTTAEAAARAYDKAAIDFRG 180
                             59*******.**********7....368**********************99887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.75E-22130188No hitNo description
SuperFamilySSF541718.5E-22131189IPR016177DNA-binding domain
PfamPF008473.8E-12131180IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.3E-32131188IPR001471AP2/ERF domain
SMARTSM003802.8E-35131194IPR001471AP2/ERF domain
PROSITE profilePS5103224.922131188IPR001471AP2/ERF domain
PRINTSPR003671.8E-11132143IPR001471AP2/ERF domain
PRINTSPR003671.8E-11154170IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    Send to blast
MQRPSKRSKT GEAPAATLFS PPEIPPVRLA QDQELALMVA ALRNVVSGTT SSDFSKELNS  60
FNEPITTSYS QFGSTSSNEN SFCNSIWPPS SDLDTCAVCK IKGCLGCNFF PPNHEDKKDD  120
KKGGEKRVKK NYRGVRQRPW GKWAAEIRDP LRAARVWLGT FTTAEAAARA YDKAAIDFRG  180
PRAKLNFPFP EGGISSFEES KEKHGKHVKQ QEKSENRSGF EEGMGKESEL WHKIGDEEMH  240
EWMMMMLDFG NGDSSGSTGT ESAATIWI*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A2e-22130189161ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0627s0010.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006384411.11e-148ethylene-responsive transcription factor ERF109
TrEMBLB9N4Y01e-147B9N4Y0_POPTR; ERF family protein
STRINGPOPTR_0004s14840.11e-148(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF29623072
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34410.11e-34redox responsive transcription factor 1