PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

SapurV1A.0474s0170.1.p

Organism

Salix purpurea

Taxonomic ID

77065

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix

Family

VOZ

Protein Properties

Length: 470aa MW: 52645 Da PI: 5.0709

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
SapurV1A.0474s0170.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	438	1.2e-134	211	427	1	217
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatak 87 p psaf+gpkcalwdctrpaq +ewl+dycssfhatlalneg+pg+tpvlrp+gidlkd+llf++l ak+qgk+vgip+cegaa +k SapurV1A.0474s0170.1.p 211 PLPSAFMGPKCALWDCTRPAQVAEWLEDYCSSFHATLALNEGPPGMTPVLRPRGIDLKDNLLFETLIAKMQGKNVGIPQCEGAAVMK 297 78*********************************************************************************** PP VOZ 88 spwnaaelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyei 174 spwna+elfdlsllegetirewlffdkprraf+sgnrkqrslpdy+grgwhesrkqvmke+gg+k+syymdpqp++++ewhl+eyei SapurV1A.0474s0170.1.p 298 SPWNATELFDLSLLEGETIREWLFFDKPRRAFDSGNRKQRSLPDYNGRGWHESRKQVMKELGGQKKSYYMDPQPPGCHEWHLFEYEI 384 *********************************************************************************** PP VOZ 175 neldalalyrlelklvdekksakgkvskdsladlqkklgrlta 217 n++d +alyrlelkl+++kks+kgkvskd+ladlqkk+grlta SapurV1A.0474s0170.1.p 385 NNCDVCALYRLELKLTNGKKSPKGKVSKDPLADLQKKMGRLTA 427 ***************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 470 aa Download sequence Send to blast
MQKGKKSKCT TMSHHQLMDN TKNRLNDLHE RFSNLQAARK EGRNSDVAVL EEQVYQSLHE 60 WKAELHVPSP ANSLLDTSLG SFSNDIGRML QLCEEEDDAM SPFTIQSVLK PEMQPEPNFQ 120 NLDLGNLTTF EDEYLVNSHS QGLGFQGFHQ PNSSPSGLQN VAVSALDITT LLDCQQFTLD 180 EEFDPGIFVG TNDTEECDKN TESYNLQYIS PLPSAFMGPK CALWDCTRPA QVAEWLEDYC 240 SSFHATLALN EGPPGMTPVL RPRGIDLKDN LLFETLIAKM QGKNVGIPQC EGAAVMKSPW 300 NATELFDLSL LEGETIREWL FFDKPRRAFD SGNRKQRSLP DYNGRGWHES RKQVMKELGG 360 QKKSYYMDPQ PPGCHEWHLF EYEINNCDVC ALYRLELKLT NGKKSPKGKV SKDPLADLQK 420 KMGRLTAVVT TDNSPPLKGK TRADRETDSG EVNFSHDQKT SDTGTGPGP*

Sequence ? help Back to Top

Protein Sequence Length: 470 aa Download sequence Send to blast

MQKGKKSKCT TMSHHQLMDN TKNRLNDLHE RFSNLQAARK EGRNSDVAVL EEQVYQSLHE  60
WKAELHVPSP ANSLLDTSLG SFSNDIGRML QLCEEEDDAM SPFTIQSVLK PEMQPEPNFQ  120
NLDLGNLTTF EDEYLVNSHS QGLGFQGFHQ PNSSPSGLQN VAVSALDITT LLDCQQFTLD  180
EEFDPGIFVG TNDTEECDKN TESYNLQYIS PLPSAFMGPK CALWDCTRPA QVAEWLEDYC  240
SSFHATLALN EGPPGMTPVL RPRGIDLKDN LLFETLIAKM QGKNVGIPQC EGAAVMKSPW  300
NATELFDLSL LEGETIREWL FFDKPRRAFD SGNRKQRSLP DYNGRGWHES RKQVMKELGG  360
QKKSYYMDPQ PPGCHEWHLF EYEINNCDVC ALYRLELKLT NGKKSPKGKV SKDPLADLQK  420
KMGRLTAVVT TDNSPPLKGK TRADRETDSG EVNFSHDQKT SDTGTGPGP*

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	SapurV1A.0474s0170.1.p

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AC213156	0.0	AC213156.1 Populus trichocarpa clone POP076-I18, complete sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_024438833.1	0.0	transcription factor VOZ1
Swissprot	Q9SGQ0	1e-163	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	A0A2K1Y4Q3	0.0	A0A2K1Y4Q3_POPTR; Uncharacterized protein
STRING	POPTR_0013s12690.1	0.0	(Populus trichocarpa)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF1498	34	94

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	1e-166	vascular plant one zinc finger protein

Link Out ? help Back to Top
Phytozome	SapurV1A.0474s0170.1.p

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]