PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0356s0010.1.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family WRKY
Protein Properties Length: 330aa    MW: 36757.5 Da    PI: 6.5036
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0356s0010.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY72.75e-23133193259
                             --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
                    WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                             dDg++WrKYGqK++ ++++pr+Y+rCt++   +C+++k+v++  e+p +  +tY g+H+++
  SapurV1A.0356s0010.1.p 133 DDGHAWRKYGQKVILNAKYPRNYFRCTHKydqHCQATKQVQQLGEEPALYRTTYIGHHTCK 193
                             8***************************99999**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.8E-24117194IPR003657WRKY domain
SuperFamilySSF1182901.83E-23127193IPR003657WRKY domain
PROSITE profilePS5081118.751127190IPR003657WRKY domain
SMARTSM007747.0E-35132194IPR003657WRKY domain
PfamPF031061.4E-22133193IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    Send to blast
MESCWHEELP SNRKKAIDKL LRGQQVAEQL KLVMNNSIGG DGSVFAENLV KEIMNSFTST  60
LSMFNGGECD DVFSQIPATT KVRSPCWDGR KSSEDSGESS KSTAAVKVKD RRGCYKRRKS  120
SHTWTNDSST LTDDGHAWRK YGQKVILNAK YPRNYFRCTH KYDQHCQATK QVQQLGEEPA  180
LYRTTYIGHH TCKNLQKGSQ FVSDPLDHYP TDSSTLLSFN SNGDHPMMTT RKSSPVLITA  240
LQSIKQEYHN QDSDMPGYDP TIHNNQATSS DYLLSTDHDH GHVSAFDHGD VVSGVNSSCT  300
TSPHSLDFDS FMAESVGFDD GADILGFEF*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A6e-24133193969OsWRKY45
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0356s0010.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002309186.31e-180probable WRKY transcription factor 70
TrEMBLA0A2K2A0861e-179A0A2K2A086_POPTR; Uncharacterized protein
STRINGPOPTR_0006s10950.11e-179(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF19953486
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.18e-37WRKY DNA-binding protein 70