PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SapurV1A.0203s0150.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
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Family | G2-like | ||||||||
Protein Properties | Length: 298aa MW: 32971.9 Da PI: 8.0272 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 103.1 | 1.7e-32 | 19 | 72 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtpeLH++Fv+a+e+LGG++ AtPk +l+lm+vkgLt++hvkSHLQ+YR+ SapurV1A.0203s0150.2.p 19 PRLRWTPELHHCFVHAIERLGGQDMATPKLVLQLMDVKGLTISHVKSHLQMYRS 72 8****************************************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 2.0E-31 | 15 | 74 | IPR009057 | Homeodomain-like |
PROSITE profile | PS51294 | 12.47 | 15 | 75 | IPR017930 | Myb domain |
SuperFamily | SSF46689 | 1.22E-15 | 17 | 73 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 2.8E-23 | 19 | 72 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 7.9E-9 | 20 | 71 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 298 aa Download sequence Send to blast |
MGSFGRSGAV RQYVRSKVPR LRWTPELHHC FVHAIERLGG QDMATPKLVL QLMDVKGLTI 60 SHVKSHLQMY RSMRSGDLSR QDRSSTQHKG QSFDVYDECV EEVKAIEESD SHLMYRPLSS 120 KRARIETRSS ISAEFLQCSQ GICETISNPY TVNDNAGIKK ANGGGFKWEQ AHSKPQPAAS 180 SLPHDLYNTN PSRREVEETD FLKIAKLLGD RKCRPEKLYA PEVTGSGRAE DEEPAGCELS 240 LALSLPHPTS HRSDSSSTSG ISEAFSSYSR SNFRDCPGFS TGKRDINLDL SIAFCGA* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4r_A | 2e-18 | 20 | 74 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_B | 2e-18 | 20 | 74 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_C | 2e-18 | 20 | 74 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_D | 2e-18 | 20 | 74 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | SapurV1A.0203s0150.2.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024465798.1 | 1e-176 | putative Myb family transcription factor At1g14600 | ||||
TrEMBL | A0A2K1YRP7 | 1e-175 | A0A2K1YRP7_POPTR; Uncharacterized protein | ||||
STRING | XP_002521884.1 | 1e-137 | (Ricinus communis) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G14600.1 | 2e-32 | G2-like family protein |
Link Out ? help Back to Top | |
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Phytozome | SapurV1A.0203s0150.2.p |