PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0186s0290.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family FAR1
Protein Properties Length: 706aa    MW: 79754.2 Da    PI: 5.8872
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0186s0290.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR155.32.2e-1758142289
                    FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 
                             + ++YAk +GF+ r ++s+k+k nge    ++vC+keg+++++ k+    +  r++ r gC+  +  ++++dg+w+++k++l+H He
  SapurV1A.0186s0290.1.p  58 YLQSYAKAIGFQWRYRTSRKNKSNGERCGVRMVCTKEGTNKPRGKS---PKYFRPSGREGCNVAMSSSLQSDGRWKISKIHLQHCHE 141
                             5689***************************************999...8899*********************************9 PP

                    FAR1  89 l 89 
                             +
  SapurV1A.0186s0290.1.p 142 I 142
                             7 PP

2FAR132.72.5e-10195272290
                    FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 
                             f  +YAk+vGF+ ++++s+k k++g++    +vCsk+ +r++ +           ++  gC+ +l  +++kdg+w+++k +l H He
  SapurV1A.0186s0290.1.p 195 FLFSYAKNVGFQWSIRTSRKDKNSGKTCGICMVCSKNKRRKQPN-----------SEGEGCDVSLCSTLQKDGQWKINKTHLRHCHE 270
                             6668******************************9987666654...........4589**************************** PP

                    FAR1  89 la 90 
                             + 
  SapurV1A.0186s0290.1.p 271 MD 272
                             96 PP

3FAR146.51.2e-14350427390
                    FAR1   3 YneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 
                              ++YAk vGF+ rk++s+k++++gei   ++vC+kegk ++             + + gC   ++ +++kdg+w+++k++leH+He+
  SapurV1A.0186s0290.1.p 350 LCSYAKAVGFEWRKRTSRKNENSGEICGVRMVCNKEGKLSSLGP----------SMKKGCPVAVNSTLQKDGRWRINKINLEHSHEI 426
                             579**********************************9998654..........5999***************************98 PP

                    FAR1  90 a 90 
                              
  SapurV1A.0186s0290.1.p 427 D 427
                             6 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031015.2E-1458142IPR004330FAR1 DNA binding domain
PfamPF031011.8E-6195272IPR004330FAR1 DNA binding domain
PfamPF031013.6E-11349427IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 706 aa     Download sequence    Send to blast
MDELFRLSIG GSANSDVNIS GVEAAGPTSL SADGADRNLI QPPYDGQTFG SLEEMVQYLQ  60
SYAKAIGFQW RYRTSRKNKS NGERCGVRMV CTKEGTNKPR GKSPKYFRPS GREGCNVAMS  120
SSLQSDGRWK ISKIHLQHCH EIDLNAIPLH MRQHLLELND RSGTEEEEEE ENEEEEEGKP  180
YDGQTFGSYA ELIQFLFSYA KNVGFQWSIR TSRKDKNSGK TCGICMVCSK NKRRKQPNSE  240
GEGCDVSLCS TLQKDGQWKI NKTHLRHCHE MDPNATPILR RWYLLALNGR LGIEEEEGKE  300
EGEEMEEGEG ETEQEEAGNS SLSSDIDRPS INPLYNGQTF GSLQELIQYL CSYAKAVGFE  360
WRKRTSRKNE NSGEICGVRM VCNKEGKLSS LGPSMKKGCP VAVNSTLQKD GRWRINKINL  420
EHSHEIDPNA RPFLRRRQRC IPPQLRDPLV SNDRLGIEDE EEREEEEGEE GAVSVALEQP  480
LDSSGDEYDS PSIMEEQPSF EASFNQQSPD LAGDAGQHWK KLKRDMGKMT TSKSDNIKQL  540
SNMERTADVL ISQYSGDDVK TTLQDVRKLI IGHKNKVFHL RSSKNSAQAE CKNLYRENPD  600
LSAMIDRAKL AIQVEESKLS QLTCEEARIE EAIQNLMAKK QSVLLQKASA AKNIENENQK  660
MEELKSTQEK INKAENSFRR WQNEMSYANS TFISNLMGSK MVLFK*
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0186s0290.1.p
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011036894.10.0PREDICTED: histone acetyltransferase KAT6B-like
TrEMBLA0A2K2AAK50.0A0A2K2AAK5_POPTR; Uncharacterized protein
STRINGPOPTR_0005s02350.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2311534
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06250.12e-13FAR1-related sequence 7