PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0063s0130.3.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family bZIP
Protein Properties Length: 337aa    MW: 35627 Da    PI: 6.7313
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0063s0130.3.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_171.31.4e-22239301163
                             XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                  bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                             e+elkr+rrkq+NRe+ArrsR+RK+ae++eL++++++L++eN  L++e++++k e+++l +e+
  SapurV1A.0063s0130.3.p 239 ERELKRQRRKQSNRESARRSRLRKQAECDELAQRADVLKEENANLRSEVNRIKSEYEQLLAEN 301
                             89*********************************************************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077774.1E-9133IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165965.2E-5672207No hitNo description
Gene3DG3DSA:1.20.5.1704.5E-17232297No hitNo description
PfamPF001701.1E-20239301IPR004827Basic-leucine zipper domain
SMARTSM003386.7E-21239303IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.128241304IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.94E-11242298No hitNo description
CDDcd147027.14E-23244294No hitNo description
PROSITE patternPS000360246261IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    Send to blast
MWGVQHIMPP YGTQPHPYVA MYPHGVYAHP SIPPGSYPFS PFAMPSPNGI AEVSGNTPGS  60
MEAEGRPSDA KEKLPIKRSK GSFGSLNMIT GKNNEHGRTT GASANGAYSK SAESGSEGTS  120
EGSDADSQSD SQMKSGGRQD SLEETSQNGG SAHVAQNGGQ GASSIMNQTM GVLPISAASA  180
PGSIPGPTTN LNIGMDYWGA PAASSVPAIH GKVPSTPVAG GIVTTGSRDG QSQLWLQDER  240
ELKRQRRKQS NRESARRSRL RKQAECDELA QRADVLKEEN ANLRSEVNRI KSEYEQLLAE  300
NASLKERLGE APGPEDSRAG RNDQHTSNDT QQTGQT*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1255261RRSRLRK
2255262RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds to the G-box motif (5'-CACGTG-3') and other cis-acting elements with 5'-ACGT-3' core, such as Hex, C-box and as-1 motifs. Possesses high binding affinity to G-box, much lower affinity to Hex and C-box, and little affinity to as-1 element (PubMed:18315949). G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control (Probable). Binds to the G-box motif 5'-CACGTG-3' of LHCB2.4 (At3g27690) promoter. May act as transcriptional repressor in light-regulated expression of LHCB2.4. Binds DNA as monomer. DNA-binding activity is redox-dependent (PubMed:22718771). {ECO:0000269|PubMed:18315949, ECO:0000269|PubMed:22718771, ECO:0000305|PubMed:18315949}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00291DAPTransfer from AT2G35530Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0063s0130.3.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011028102.10.0PREDICTED: transcription factor HBP-1a
RefseqXP_011028103.10.0PREDICTED: transcription factor HBP-1a
SwissprotQ501B21e-143BZP16_ARATH; bZIP transcription factor 16
TrEMBLB9GZK10.0B9GZK1_POPTR; Uncharacterized protein
STRINGPOPTR_0003s09630.10.0(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.11e-134basic region/leucine zipper transcription factor 16
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]