PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0060s0040.1.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family bZIP
Protein Properties Length: 144aa    MW: 16545 Da    PI: 10.1498
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0060s0040.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.34.5e-102359339
                            XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                  bZIP_1  3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLe 39
                            ++kr +r+++NRe+ArrsR ++++++e L  +   Le
  SapurV1A.0060s0040.1.p 23 DDKRRKRMISNRESARRSRMKRQKQMEGLVSEKSILE 59
                            58*************************9987766666 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.0E-82163No hitNo description
SMARTSM003383.2E-52199IPR004827Basic-leucine zipper domain
PfamPF001709.6E-82461IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.64E-82579No hitNo description
CDDcd147025.56E-122669No hitNo description
PROSITE patternPS0003602843IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 144 aa     Download sequence    Send to blast
MSPSLAMAGS SGSDVDAPNA MIDDKRRKRM ISNRESARRS RMKRQKQMEG LVSEKSILER  60
KIHEDNDKYF AVWQNHFALE SQNKILRDEK MKLAEKLKNL QHILASYEVP ESDKDIEVSD  120
KFLNPWQVSS PVKLITTSGM FKF*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13843RSRMKR
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0060s0040.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002312336.24e-86bZIP transcription factor 53
TrEMBLB9HIQ09e-85B9HIQ0_POPTR; Uncharacterized protein
STRINGPOPTR_0008s10620.11e-85(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF15536812
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G62420.18e-23basic region/leucine zipper motif 53