PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0051s0250.2.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family bZIP
Protein Properties Length: 349aa    MW: 36827.4 Da    PI: 7.8425
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0051s0250.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1711.8e-22251313163
                             XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                  bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                             e+elkr+rrkq+NRe+ArrsR+RK+ae++eL++++++L++eN +L++e++++k e+++l +e+
  SapurV1A.0051s0250.2.p 251 ERELKRQRRKQSNRESARRSRLRKQAECDELAQRAEALKEENASLRSEVNQIKSEYEQLLAEN 313
                             89*********************************************************9998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077773.5E-15143IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165968.6E-5782218No hitNo description
Gene3DG3DSA:1.20.5.1703.9E-18244309No hitNo description
SMARTSM003382.0E-22251315IPR004827Basic-leucine zipper domain
PfamPF001706.1E-21251313IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.449253316IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.0E-11254310No hitNo description
CDDcd147025.15E-23256306No hitNo description
PROSITE patternPS000360258273IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    Send to blast
MASSPQAHPY MWGVQHIMPP YGTPPHPYVA MYPHGVYAHP SIPPGSYPFS PFAMPSPNGI  60
AEVSGNTPGS MEADGRPSDV KEKLPIKRSK GSLGSLNMIT GKNNEHGKTT GVSANGVYSK  120
SAESGSEGSS EGSDANSQSD SQMKSGGRQD SLEDTSQNGG SAHGAQNGGH GATSTIMNQT  180
MAVVPISAAS ASGALPGPTT NLNIGMDYWG APASSNAPAI RGKVPSAPVA GGVVSTGSRD  240
GAQSQIWLQD ERELKRQRRK QSNRESARRS RLRKQAECDE LAQRAEALKE ENASLRSEVN  300
QIKSEYEQLL AENTSLKERL AKVSGQEDIR AGRNDQHMSN DTQQTGQT*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1267273RRSRLRK
2267274RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds to the G-box motif (5'-CACGTG-3') and other cis-acting elements with 5'-ACGT-3' core, such as Hex, C-box and as-1 motifs. Possesses high binding affinity to G-box, much lower affinity to Hex and C-box, and little affinity to as-1 element (PubMed:18315949). G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control (Probable). Binds to the G-box motif 5'-CACGTG-3' of LHCB2.4 (At3g27690) promoter. May act as transcriptional repressor in light-regulated expression of LHCB2.4. Binds DNA as monomer. DNA-binding activity is redox-dependent (PubMed:22718771). {ECO:0000269|PubMed:18315949, ECO:0000269|PubMed:22718771, ECO:0000305|PubMed:18315949}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0051s0250.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002297692.30.0bZIP transcription factor 16 isoform X1
RefseqXP_024438024.10.0bZIP transcription factor 16 isoform X1
SwissprotQ501B21e-155BZP16_ARATH; bZIP transcription factor 16
TrEMBLA0A2K2BX380.0A0A2K2BX38_POPTR; Uncharacterized protein
STRINGPOPTR_0001s01840.10.0(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.11e-146basic region/leucine zipper transcription factor 16
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]