PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SapurV1A.0032s0720.9.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
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Family | VOZ | ||||||||
Protein Properties | Length: 460aa MW: 51058.2 Da PI: 5.123 | ||||||||
Description | VOZ family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | VOZ | 429 | 7.2e-132 | 177 | 393 | 2 | 217 |
VOZ 2 ppsaflgpkcalwdctrpaqg.sewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatak 87 ppsaflgpkcalwdc+rpaqg +w+qdycssfh ++alneg+pg++p+lrp+gi+lkdgllf++lsakv+gk+vgipecegaatak SapurV1A.0032s0720.9.p 177 PPSAFLGPKCALWDCSRPAQGgLDWFQDYCSSFHHAVALNEGPPGLSPILRPGGIGLKDGLLFSSLSAKVEGKDVGIPECEGAATAK 263 7******************9648**************************************************************** PP VOZ 88 spwnaaelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyei 174 spwna+elfdls+l+getirewlffdkprrafesgnrkqrslpdy+grgwhesrkqvm+efgglkrsyymdpqp+++fewhlyeyei SapurV1A.0032s0720.9.p 264 SPWNAPELFDLSVLKGETIREWLFFDKPRRAFESGNRKQRSLPDYTGRGWHESRKQVMNEFGGLKRSYYMDPQPLNNFEWHLYEYEI 350 *************************************************************************************** PP VOZ 175 neldalalyrlelklvdekksakgkvskdsladlqkklgrlta 217 n++da+alyrlelk vd+kksakgkv+++s+adlqk++grlta SapurV1A.0032s0720.9.p 351 NNCDACALYRLELKAVDGKKSAKGKVANESVADLQKQMGRLTA 393 *****************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 460 aa Download sequence Send to blast |
MVDVAVLEEQ VHQMLREWKA ELNEPSPASS LQQVIIEYHI PFIVHGGSLG SFSTDICRLL 60 QLCEEEDDAT SALAAPKLEP NDQRLQVGNN VVFQEGYGVN HGQQEHVFPF VDQCKASPSG 120 DRSMVINSVE GVAQLEYHDF DLPQNSEQNF YTGFNGMDLG EDATHLVSSY LPSMFLPPSA 180 FLGPKCALWD CSRPAQGGLD WFQDYCSSFH HAVALNEGPP GLSPILRPGG IGLKDGLLFS 240 SLSAKVEGKD VGIPECEGAA TAKSPWNAPE LFDLSVLKGE TIREWLFFDK PRRAFESGNR 300 KQRSLPDYTG RGWHESRKQV MNEFGGLKRS YYMDPQPLNN FEWHLYEYEI NNCDACALYR 360 LELKAVDGKK SAKGKVANES VADLQKQMGR LTAEFPAEHK RAVKGRTKVN SKASVGNVYS 420 GSTRVAPPTN EAYDNGSGPH YDYLTENLGD YYLTQFKKP* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269|PubMed:15295067, ECO:0000269|PubMed:22904146}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | SapurV1A.0032s0720.9.p |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By far-red light. {ECO:0000269|PubMed:22904146}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_006377435.1 | 0.0 | transcription factor VOZ1 isoform X1 | ||||
Refseq | XP_024437335.1 | 0.0 | transcription factor VOZ1 isoform X1 | ||||
Swissprot | Q9SGQ0 | 0.0 | VOZ1_ARATH; Transcription factor VOZ1 | ||||
TrEMBL | B9N9L2 | 0.0 | B9N9L2_POPTR; Uncharacterized protein | ||||
STRING | POPTR_0011s05890.1 | 0.0 | (Populus trichocarpa) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G28520.2 | 0.0 | vascular plant one zinc finger protein |
Link Out ? help Back to Top | |
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Phytozome | SapurV1A.0032s0720.9.p |
Publications ? help Back to Top | |||
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