PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SapurV1A.0032s0720.5.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
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Family | VOZ | ||||||||
Protein Properties | Length: 491aa MW: 54506.1 Da PI: 5.9632 | ||||||||
Description | VOZ family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | VOZ | 428.7 | 8.4e-132 | 208 | 424 | 2 | 217 |
VOZ 2 ppsaflgpkcalwdctrpaqg.sewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatak 87 ppsaflgpkcalwdc+rpaqg +w+qdycssfh ++alneg+pg++p+lrp+gi+lkdgllf++lsakv+gk+vgipecegaatak SapurV1A.0032s0720.5.p 208 PPSAFLGPKCALWDCSRPAQGgLDWFQDYCSSFHHAVALNEGPPGLSPILRPGGIGLKDGLLFSSLSAKVEGKDVGIPECEGAATAK 294 7******************9648**************************************************************** PP VOZ 88 spwnaaelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyei 174 spwna+elfdls+l+getirewlffdkprrafesgnrkqrslpdy+grgwhesrkqvm+efgglkrsyymdpqp+++fewhlyeyei SapurV1A.0032s0720.5.p 295 SPWNAPELFDLSVLKGETIREWLFFDKPRRAFESGNRKQRSLPDYTGRGWHESRKQVMNEFGGLKRSYYMDPQPLNNFEWHLYEYEI 381 *************************************************************************************** PP VOZ 175 neldalalyrlelklvdekksakgkvskdsladlqkklgrlta 217 n++da+alyrlelk vd+kksakgkv+++s+adlqk++grlta SapurV1A.0032s0720.5.p 382 NNCDACALYRLELKAVDGKKSAKGKVANESVADLQKQMGRLTA 424 *****************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 491 aa Download sequence Send to blast |
MGKGSKINCK SASHKLFKDK AKNRVDDLQG MFLDLQFARK ESRMVDVAVL EEQVHQMLRE 60 WKAELNEPSP ASSLQQGGSL GSFSTDICRL LQLCEEEDDA TSALAAPKLE PNDQRLQVGN 120 NVVFQEGYGV NHGQQEHVFP FVDQCKASPS GDRSMVINSV EGVAQLEYHD FDLPQNSEQN 180 FYTGFNGMDL GEDATHLVSS YLPSMFLPPS AFLGPKCALW DCSRPAQGGL DWFQDYCSSF 240 HHAVALNEGP PGLSPILRPG GIGLKDGLLF SSLSAKVEGK DVGIPECEGA ATAKSPWNAP 300 ELFDLSVLKG ETIREWLFFD KPRRAFESGN RKQRSLPDYT GRGWHESRKQ VMNEFGGLKR 360 SYYMDPQPLN NFEWHLYEYE INNCDACALY RLELKAVDGK KSAKGKVANE SVADLQKQMG 420 RLTAEFPAEH KRAVKGRTKV NSKASVGNVY SGSTRVAPPT NEAYDNGSGP HYDYLTENLG 480 DYYLTQFKKP * |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269|PubMed:15295067, ECO:0000269|PubMed:22904146}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | SapurV1A.0032s0720.5.p |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By far-red light. {ECO:0000269|PubMed:22904146}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_006377435.1 | 0.0 | transcription factor VOZ1 isoform X1 | ||||
Refseq | XP_024437335.1 | 0.0 | transcription factor VOZ1 isoform X1 | ||||
Swissprot | Q9SGQ0 | 0.0 | VOZ1_ARATH; Transcription factor VOZ1 | ||||
TrEMBL | B9N9L2 | 0.0 | B9N9L2_POPTR; Uncharacterized protein | ||||
STRING | POPTR_0011s05890.1 | 0.0 | (Populus trichocarpa) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G28520.2 | 0.0 | vascular plant one zinc finger protein |
Link Out ? help Back to Top | |
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Phytozome | SapurV1A.0032s0720.5.p |
Publications ? help Back to Top | |||
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