PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SapurV1A.0012s0820.20.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
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Family | VOZ | ||||||||
Protein Properties | Length: 435aa MW: 48258.9 Da PI: 4.6929 | ||||||||
Description | VOZ family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | VOZ | 434.8 | 1.2e-133 | 152 | 369 | 1 | 217 |
VOZ 1 pppsaflgpkcalwdctrpaqg.sewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaat 85 pppsaflgpkcalwdc+rpaqg ew+qdycssfh +lalneg+pg++pvlrp+gi+lkdgllfaalsak++ k+vgipecegaat SapurV1A.0012s0820.20.p 152 PPPSAFLGPKCALWDCPRPAQGgLEWCQDYCSSFHHSLALNEGPPGMSPVLRPGGIGLKDGLLFAALSAKAEEKDVGIPECEGAAT 237 89******************9648************************************************************** PP VOZ 86 akspwnaaelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlye 171 akspwna+elfdl +legetirewlffdkprrafesgnrkqrslpdy+grgwhesrkqvm+efgglkrsyymdpqp+++fewhlye SapurV1A.0012s0820.20.p 238 AKSPWNAPELFDLFVLEGETIREWLFFDKPRRAFESGNRKQRSLPDYTGRGWHESRKQVMNEFGGLKRSYYMDPQPLNNFEWHLYE 323 ************************************************************************************** PP VOZ 172 yeineldalalyrlelklvdekksakgkvskdsladlqkklgrlta 217 yei+++da+alyrlelk vd+kksakgk++++s+adlqk++grlta SapurV1A.0012s0820.20.p 324 YEISKCDACALYRLELKAVDGKKSAKGKIANESVADLQKQMGRLTA 369 ********************************************97 PP |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009408 | Biological Process | response to heat | ||||
GO:0009414 | Biological Process | response to water deprivation | ||||
GO:0009631 | Biological Process | cold acclimation | ||||
GO:0009816 | Biological Process | defense response to bacterium, incompatible interaction | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0048578 | Biological Process | positive regulation of long-day photoperiodism, flowering | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 435 aa Download sequence Send to blast |
MLREWKSELN EPSPASSLQQ GGSLGSFSTD ICRLLQLCEE EDDATSALAA PKLEPNDQSM 60 QAGDKVVFQE AYAVNHGQQE HAFPFVDQCK DSPTGVRSLA ISNIEGAAQL DYHQFDLPQT 120 FEQNFYTDFN GTDLGEEDGM PHVSSYLPSM CPPPSAFLGP KCALWDCPRP AQGGLEWCQD 180 YCSSFHHSLA LNEGPPGMSP VLRPGGIGLK DGLLFAALSA KAEEKDVGIP ECEGAATAKS 240 PWNAPELFDL FVLEGETIRE WLFFDKPRRA FESGNRKQRS LPDYTGRGWH ESRKQVMNEF 300 GGLKRSYYMD PQPLNNFEWH LYEYEISKCD ACALYRLELK AVDGKKSAKG KIANESVADL 360 QKQMGRLTAE FPSDNKRAVK GRTKVNAKVG VGNVYSGSTQ VAPPNEAYDY GPAPHYDYLV 420 ENLEDYYLTE FKKP* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269|PubMed:15295067, ECO:0000269|PubMed:22904146}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | SapurV1A.0012s0820.20.p |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By far-red light. {ECO:0000269|PubMed:22904146}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_002305772.1 | 0.0 | transcription factor VOZ1 isoform X1 | ||||
Refseq | XP_024455709.1 | 0.0 | transcription factor VOZ1 isoform X1 | ||||
Refseq | XP_024455710.1 | 0.0 | transcription factor VOZ1 isoform X1 | ||||
Refseq | XP_024455711.1 | 0.0 | transcription factor VOZ1 isoform X1 | ||||
Swissprot | Q9SGQ0 | 0.0 | VOZ1_ARATH; Transcription factor VOZ1 | ||||
TrEMBL | B9H2N9 | 0.0 | B9H2N9_POPTR; Uncharacterized protein | ||||
STRING | POPTR_0004s05030.1 | 0.0 | (Populus trichocarpa) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G28520.2 | 0.0 | vascular plant one zinc finger protein |
Link Out ? help Back to Top | |
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Phytozome | SapurV1A.0012s0820.20.p |
Publications ? help Back to Top | |||
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