PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

SapurV1A.0012s0820.17.p

Organism

Salix purpurea

Taxonomic ID

77065

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix

Family

VOZ

Protein Properties

Length: 435aa MW: 48258.9 Da PI: 4.6929

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
SapurV1A.0012s0820.17.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	434.8	1.2e-133	152	369	1	217
VOZ 1 pppsaflgpkcalwdctrpaqg.sewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaat 85 pppsaflgpkcalwdc+rpaqg ew+qdycssfh +lalneg+pg++pvlrp+gi+lkdgllfaalsak++ k+vgipecegaat SapurV1A.0012s0820.17.p 152 PPPSAFLGPKCALWDCPRPAQGgLEWCQDYCSSFHHSLALNEGPPGMSPVLRPGGIGLKDGLLFAALSAKAEEKDVGIPECEGAAT 237 89****************9648********************************************************** PP VOZ 86 akspwnaaelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlye 171 akspwna+elfdl +legetirewlffdkprrafesgnrkqrslpdy+grgwhesrkqvm+efgglkrsyymdpqp+++fewhlye SapurV1A.0012s0820.17.p 238 AKSPWNAPELFDLFVLEGETIREWLFFDKPRRAFESGNRKQRSLPDYTGRGWHESRKQVMNEFGGLKRSYYMDPQPLNNFEWHLYE 323 ********************************************************************************** PP VOZ 172 yeineldalalyrlelklvdekksakgkvskdsladlqkklgrlta 217 yei+++da+alyrlelk vd+kksakgk++++s+adlqk++grlta SapurV1A.0012s0820.17.p 324 YEISKCDACALYRLELKAVDGKKSAKGKIANESVADLQKQMGRLTA 369 ******************************************97 PP

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0009408	Biological Process	response to heat
GO:0009414	Biological Process	response to water deprivation
GO:0009631	Biological Process	cold acclimation
GO:0009816	Biological Process	defense response to bacterium, incompatible interaction
GO:0045893	Biological Process	positive regulation of transcription, DNA-templated
GO:0048578	Biological Process	positive regulation of long-day photoperiodism, flowering
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 435 aa Download sequence Send to blast
MLREWKSELN EPSPASSLQQ GGSLGSFSTD ICRLLQLCEE EDDATSALAA PKLEPNDQSM 60 QAGDKVVFQE AYAVNHGQQE HAFPFVDQCK DSPTGVRSLA ISNIEGAAQL DYHQFDLPQT 120 FEQNFYTDFN GTDLGEEDGM PHVSSYLPSM CPPPSAFLGP KCALWDCPRP AQGGLEWCQD 180 YCSSFHHSLA LNEGPPGMSP VLRPGGIGLK DGLLFAALSA KAEEKDVGIP ECEGAATAKS 240 PWNAPELFDL FVLEGETIRE WLFFDKPRRA FESGNRKQRS LPDYTGRGWH ESRKQVMNEF 300 GGLKRSYYMD PQPLNNFEWH LYEYEISKCD ACALYRLELK AVDGKKSAKG KIANESVADL 360 QKQMGRLTAE FPSDNKRAVK GRTKVNAKVG VGNVYSGSTQ VAPPNEAYDY GPAPHYDYLV 420 ENLEDYYLTE FKKP*

Sequence ? help Back to Top

Protein Sequence Length: 435 aa Download sequence Send to blast

MLREWKSELN EPSPASSLQQ GGSLGSFSTD ICRLLQLCEE EDDATSALAA PKLEPNDQSM  60
QAGDKVVFQE AYAVNHGQQE HAFPFVDQCK DSPTGVRSLA ISNIEGAAQL DYHQFDLPQT  120
FEQNFYTDFN GTDLGEEDGM PHVSSYLPSM CPPPSAFLGP KCALWDCPRP AQGGLEWCQD  180
YCSSFHHSLA LNEGPPGMSP VLRPGGIGLK DGLLFAALSA KAEEKDVGIP ECEGAATAKS  240
PWNAPELFDL FVLEGETIRE WLFFDKPRRA FESGNRKQRS LPDYTGRGWH ESRKQVMNEF  300
GGLKRSYYMD PQPLNNFEWH LYEYEISKCD ACALYRLELK AVDGKKSAKG KIANESVADL  360
QKQMGRLTAE FPSDNKRAVK GRTKVNAKVG VGNVYSGSTQ VAPPNEAYDY GPAPHYDYLV  420
ENLEDYYLTE FKKP*

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	SapurV1A.0012s0820.17.p

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_002305772.1	0.0	transcription factor VOZ1 isoform X1
Refseq	XP_024455709.1	0.0	transcription factor VOZ1 isoform X1
Refseq	XP_024455710.1	0.0	transcription factor VOZ1 isoform X1
Refseq	XP_024455711.1	0.0	transcription factor VOZ1 isoform X1
Swissprot	Q9SGQ0	0.0	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	B9H2N9	0.0	B9H2N9_POPTR; Uncharacterized protein
STRING	POPTR_0004s05030.1	0.0	(Populus trichocarpa)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	0.0	vascular plant one zinc finger protein

Link Out ? help Back to Top
Phytozome	SapurV1A.0012s0820.17.p

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]