PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0009s0320.1.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family EIL
Protein Properties Length: 597aa    MW: 66905.1 Da    PI: 5.4544
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0009s0320.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3432.93.1e-132394102350
                             XXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
                    EIN3   2 elkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegas 88 
                              l++rmwkd ++lkr+ke++k   ++++ a++++k +++++qarrkkm+raQDgiLkYMlk mevc+a+GfvYgiipekgkpv+gas
  SapurV1A.0009s0320.1.p  39 ALERRMWKDLVKLKRIKEKQKL--AAQQ-AAEKQKPKQTTDQARRKKMARAQDGILKYMLKLMEVCKARGFVYGIIPEKGKPVSGAS 122
                             589***********99999885..3455.599******************************************************* PP

                             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH--- CS
                    EIN3  89 dsLraWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPt 175
                             d++raWWkekv+fd+ngpaai+ky+a++l+ ++++++  ++  +++ l++lqD+tlgSLLs+lmqhcdppqr++plekgv+pPWWPt
  SapurV1A.0009s0320.1.p 123 DNIRAWWKEKVKFDKNGPAAIAKYEAECLAIGEAENS--RNGCSQSALQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGVPPPWWPT 207
                             ********************************99988..6799999***************************************** PP

                             S--HHHHHHT--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXX CS
                    EIN3 176 GkelwwgelglskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsa 262
                             G+e+ww +lgls  q+ ppykkphdlkk+wkv+vLtavikhm p+i++ir+++rqsk+lqdkm+akes+++l vl++ee+++++ s 
  SapurV1A.0009s0320.1.p 208 GNEDWWVKLGLSLGQS-PPYKKPHDLKKMWKVGVLTAVIKHMTPDIAKIRRHVRQSKCLQDKMTAKESAIWLGVLSREESLIQQPSI 293
                             ***************9.9********************************************************************* PP

                             XXX.........XXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXX.....................XXXXXXXXXXXXXXXXX CS
                    EIN3 263 hss.........slrkqspkvtlsceqkedvegkkeskikhvqavktta.....................gfpvvrkrkkkpsesak 319
                             ++             +q++k  +s+++++dv+g ++   + ++++++++                     ++   r+r+k+p+e+++
  SapurV1A.0009s0320.1.p 294 DNGtsgvtespqGGCRQKKKPAISSDSDYDVNGVDDGVGSVSSKDNRRNqpmdveplshrndiaipvqdkELGGKRRRRKRPREKSS 380
                             944446766555333499999***********87777778888888888999****************5444444444445555555 PP

                             XXXX......XXXXXXX.XXXXXXXXXXXXX CS
                    EIN3 320 vsskevsrtcqssqfrgsetelifadknsis 350
                               ++  sr   + ++   e+ ++++d n+++
  SapurV1A.0009s0320.1.p 381 HADQ-QSRPSLNDECLAVEQTNTLPDINHTD 410
                             5555.689***************99999876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048732.1E-12539285No hitNo description
Gene3DG3DSA:1.10.3180.101.2E-70160292IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167687.06E-62166288IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 597 aa     Download sequence    Send to blast
MGELEEIGAD ICSDIEVDDI RCENIAEKDV SDEEIEAEAL ERRMWKDLVK LKRIKEKQKL  60
AAQQAAEKQK PKQTTDQARR KKMARAQDGI LKYMLKLMEV CKARGFVYGI IPEKGKPVSG  120
ASDNIRAWWK EKVKFDKNGP AAIAKYEAEC LAIGEAENSR NGCSQSALQD LQDATLGSLL  180
SSLMQHCDPP QRKYPLEKGV PPPWWPTGNE DWWVKLGLSL GQSPPYKKPH DLKKMWKVGV  240
LTAVIKHMTP DIAKIRRHVR QSKCLQDKMT AKESAIWLGV LSREESLIQQ PSIDNGTSGV  300
TESPQGGCRQ KKKPAISSDS DYDVNGVDDG VGSVSSKDNR RNQPMDVEPL SHRNDIAIPV  360
QDKELGGKRR RRKRPREKSS HADQQSRPSL NDECLAVEQT NTLPDINHTD LQPVEYQMHN  420
TQLENFTSSA LMPVEKGLVG ESSLPQSDFN YYAGVPSTND NSTERIFVDR GPAIYPLGQI  480
SELHHETTYS NIYNPSLDYG TNHDGKHSQM AMNARPEDDR FLIPALHGDG NNLTGEEPHQ  540
LAKDTLPTEQ DTAVDRHFEF DLPDFAINSP FLEMSSFSFD NLFVDPEDDL IQCFGA*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wij_A6e-761652969140ETHYLENE-INSENSITIVE3-like 3 protein
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1367372KRRRRK
2367373KRRRRKR
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in the ethylene response pathway. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0009s0320.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2142770.0AC214277.1 Populus trichocarpa clone ACSB1145-L17, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006386099.20.0ETHYLENE INSENSITIVE 3-like 3 protein
RefseqXP_024454049.10.0ETHYLENE INSENSITIVE 3-like 3 protein
SwissprotO231160.0EIL3_ARATH; ETHYLENE INSENSITIVE 3-like 3 protein
TrEMBLA0A2K2BAD40.0A0A2K2BAD4_POPTR; Uncharacterized protein
STRINGPOPTR_0003s22090.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF32234200
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73730.11e-176ETHYLENE-INSENSITIVE3-like 3
Publications ? help Back to Top
  1. Frerigmann H,Gigolashvili T
    Update on the role of R2R3-MYBs in the regulation of glucosinolates upon sulfur deficiency.
    Front Plant Sci, 2014. 5: p. 626
    [PMID:25426131]
  2. Zheng ZL,Zhang B,Leustek T
    Transceptors at the boundary of nutrient transporters and receptors: a new role for Arabidopsis SULTR1;2 in sulfur sensing.
    Front Plant Sci, 2014. 5: p. 710
    [PMID:25566284]
  3. Panda SK,Sunkar R
    Nutrient- and other stress-responsive microRNAs in plants: Role for thiol-based redox signaling.
    Plant Signal Behav, 2015. 10(4): p. e1010916
    [PMID:25912823]
  4. Wawrzyńska A,Sirko A
    EIN3 interferes with the sulfur deficiency signaling in Arabidopsis thaliana through direct interaction with the SLIM1 transcription factor.
    Plant Sci., 2016. 253: p. 50-57
    [PMID:27968996]