PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Spipo6G0032300 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Araceae; Lemnoideae; Spirodela
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Family | bZIP | ||||||||
Protein Properties | Length: 215aa MW: 22531.3 Da PI: 7.505 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 29.1 | 2.1e-09 | 62 | 116 | 3 | 57 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 + k r++ NReA r++R++Kka+++ Lee++ +L Nk+L +l++l+++ a Spipo6G0032300 62 KPKQPRKLLGNREAVRKYREKKKARTAFLEEEALKLRLLNKQLSAKLQSLEDLEA 116 568889********************************************99755 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 3.2E-8 | 60 | 127 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 2.7E-12 | 61 | 126 | No hit | No description |
PROSITE profile | PS50217 | 8.933 | 62 | 128 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.65E-7 | 64 | 114 | No hit | No description |
Pfam | PF07716 | 9.4E-10 | 67 | 112 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14686 | 3.89E-11 | 67 | 112 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 215 aa Download sequence Send to blast |
MEGGDEGLHL EIADLLRSVR ACSHTHSCSP PGAAAAGHTH TCRHTHTQVV APAAGAAGGE 60 AKPKQPRKLL GNREAVRKYR EKKKARTAFL EEEALKLRLL NKQLSAKLQS LEDLEAEVAR 120 LRGLLLGLSG KIDTEMGGCP LQNPCEDPGF QCNPNASFTA RTVSTPGLEG YCRPAVGDFH 180 GDPDAQNVGQ NSGPGAVRSM DAAGSLFSSS SPAE* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_008788583.1 | 2e-57 | basic leucine zipper 23-like | ||||
Refseq | XP_017698050.1 | 2e-57 | basic leucine zipper 23-like | ||||
TrEMBL | A0A1D1ZHT0 | 2e-57 | A0A1D1ZHT0_9ARAE; Transcription factor TGA3 | ||||
STRING | XP_008788583.1 | 9e-57 | (Phoenix dactylifera) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G51960.2 | 3e-34 | basic leucine zipper 24 |
Link Out ? help Back to Top | |
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Phytozome | Spipo6G0032300 |