PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Spipo2G0112100 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Araceae; Lemnoideae; Spirodela
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Family | bZIP | ||||||||
Protein Properties | Length: 157aa MW: 17199.5 Da PI: 11.6361 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 44.1 | 4.6e-14 | 37 | 95 | 4 | 62 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 +r rr+++NRe+ArrsR+RK+ +e L++ + L +eN++L+ +l ++ +l+ + Spipo2G0112100 37 ERRRRRMISNRESARRSRARKQRLMEGLRTQTDWLISENRELAGRLAAVADHRLALRRD 95 6899***************************************9999999988888766 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 5.6E-10 | 34 | 86 | No hit | No description |
SMART | SM00338 | 9.9E-12 | 34 | 98 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.151 | 36 | 99 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.9E-10 | 36 | 95 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 3.73E-11 | 38 | 88 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 41 | 56 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 157 aa Download sequence Send to blast |
MPSPETVAAA HPPTPDGGSG FGPPEEDPER AASPAEERRR RRMISNRESA RRSRARKQRL 60 MEGLRTQTDW LISENRELAG RLAAVADHRL ALRRDNDRLL SEAAALRRRL SDVRRLLVFR 120 QLQRLAAAAP ACGGDPQSLV PAAFAGGFMP ETELTA* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 50 | 57 | RRSRARKQ |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009362602.1 | 4e-31 | PREDICTED: bZIP transcription factor 11 | ||||
TrEMBL | A0A1D1XF28 | 3e-31 | A0A1D1XF28_9ARAE; Ocs element-binding factor 1 (Fragment) | ||||
STRING | XP_009362602.1 | 1e-30 | (Pyrus x bretschneideri) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP17765 | 5 | 10 |
Link Out ? help Back to Top | |
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Phytozome | Spipo2G0112100 |