PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Spipo0G0189900 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Araceae; Lemnoideae; Spirodela
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Family | WRKY | ||||||||
Protein Properties | Length: 201aa MW: 20723.4 Da PI: 7.3872 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 30.5 | 7.1e-10 | 181 | 200 | 3 | 22 |
-SS-EEEEEEE--TT-SS-E CS WRKY 3 DgynWrKYGqKevkgsefpr 22 D ++WrKYGqK++kgs++pr Spipo0G0189900 181 DLWAWRKYGQKPIKGSPYPR 200 99*****************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50811 | 12.805 | 174 | 200 | IPR003657 | WRKY domain |
Gene3D | G3DSA:2.20.25.80 | 6.7E-8 | 177 | 200 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 7.45E-7 | 178 | 200 | IPR003657 | WRKY domain |
Pfam | PF03106 | 2.6E-5 | 181 | 200 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 201 aa Download sequence Send to blast |
MCSCFWQKMD ADHGDLGDVV RRGAGGGCGV PPRAGQHVLE LAGFPPPEAS NDDFGDPFSS 60 FRDPLLHDLG GGAAFFGGAD TVAELGQAPV AGSGGNFSRV LQISSATKAA APTVSPPAVL 120 TPSAILSGEM ASTPLDQGEF QISSPPSPDM KRRKSQTKKV VCIPAPPASS SRPGGDVIPP 180 DLWAWRKYGQ KPIKGSPYPR * |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_008788702.1 | 2e-48 | probable WRKY transcription factor 14 | ||||
TrEMBL | A0A2H3XTU5 | 5e-47 | A0A2H3XTU5_PHODC; probable WRKY transcription factor 14 | ||||
STRING | XP_008788702.1 | 9e-48 | (Phoenix dactylifera) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G34830.1 | 5e-23 | WRKY DNA-binding protein 35 |
Link Out ? help Back to Top | |
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Phytozome | Spipo0G0189900 |