PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sp_086850_uxun.t1
Common NameSOVF_086850
Organism
Spinacia oleracea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Anserineae; Spinacia
Family bZIP
Protein Properties Length: 320aa    MW: 35302.6 Da    PI: 4.9125
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sp_086850_uxun.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_135.13e-11181226550
                        CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 
                        kr +r   NR +A+rsR RK+++i eLe+ v +L++e +aL  ++ 
  Sp_086850_uxun.t1 181 KRVKRILANRQSAQRSRVRKLQYISELERSVTTLQTEVSALSPRVA 226
                        8999*********************************999987765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.0E-13177241IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.703179231IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.29E-11181235No hitNo description
Gene3DG3DSA:1.20.5.1709.6E-14181232No hitNo description
PfamPF001708.6E-10181226IPR004827Basic-leucine zipper domain
CDDcd147031.35E-24182232No hitNo description
PROSITE patternPS000360184199IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    Send to blast
MPPLTNNVGP QQQASPPASN ANNSNNPSSW VDEFLDFTSV RRVTHRRSVS DSIAFLEVPH  60
LGDDCRNSGN AGAGGFDRLD DDQLMSMFSD DISAGITGMV GPPSSPSDQN SNNDDKDMSA  120
DNTNSNVNNN DQQLLQCFPK SEPGEVESAC NNNSDNNNQI PAPASDDANQ NSATDNILDP  180
KRVKRILANR QSAQRSRVRK LQYISELERS VTTLQTEVSA LSPRVAFLDH QRLILNVDNS  240
ALKQRIAALA QDKIFKDAHQ EALKKEIERL RQIYQHQQQQ QQNMKNKMNT NNTTSANAAS  300
TPPTSDFSNM GFADKEQLMT
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator. {ECO:0000269|PubMed:17719007}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021847306.10.0basic leucine zipper 34-like isoform X2
SwissprotQ9M2K42e-89BZP61_ARATH; Basic leucine zipper 61
TrEMBLA0A0K9RAZ50.0A0A0K9RAZ5_SPIOL; Uncharacterized protein
STRINGXP_010675419.11e-125(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58120.11e-73bZIP family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Gibalová A, et al.
    Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte.
    Plant Reprod, 2017. 30(1): p. 1-17
    [PMID:27896439]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]