PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Sof009964 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Saccharinae; Saccharum; Saccharum officinarum complex
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Family | EIL | ||||||||
Protein Properties | Length: 259aa MW: 29267.1 Da PI: 8.4641 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 174 | 1.5e-53 | 115 | 255 | 1 | 145 |
XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWWkekve 100 e+l +rmwkd+++l+r+ker+++l ++a++++ + + +++qa rkkmsra DgiLkYMlk m+vcna+GfvYgiip+kgkpv+gasd+++aW kekv+ Sof009964 115 EDLARRMWKDRVRLRRIKERQQKLA-LQQAELEKLRPKPISDQAMRKKMSRAHDGILKYMLKLMQVCNARGFVYGIIPDKGKPVSGASDNIKAWGKEKVK 213 89*******************9865.66667********************************************************************* PP XXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHH CS EIN3 101 fdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlg 145 fd+ngpa i ky+++nl+++ ++s +++++hsl++ q++ +g Sof009964 214 FDKNGPAGIEKYESDNLVSAYAQSG---GTKNPHSLEDFQEAPFG 255 ******************9988888...88**********98665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04873 | 1.3E-54 | 115 | 255 | No hit | No description |
Sequence ? help Back to Top |
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Protein Sequence Length: 259 aa Download sequence Send to blast |
PEERRIFSSI NPANHSFERP FDEKLSSIAP AWLSLSPPGP NFVWTGCCDP XAGWGSAASH 60 RRLPRFEFNR VTKVAVLMDQ LAMLATELGD SSDFEVEGIQ NLTENDVSDE EIEPEDLARR 120 MWKDRVRLRR IKERQQKLAL QQAELEKLRP KPISDQAMRK KMSRAHDGIL KYMLKLMQVC 180 NARGFVYGII PDKGKPVSGA SDNIKAWGKE KVKFDKNGPA GIEKYESDNL VSAYAQSGGT 240 KNPHSLEDFQ EAPFGLRVF |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Sof.9200 | 0.0 | crown |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor that may be involved in the ethylene response pathway. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_002462568.1 | 1e-111 | ETHYLENE INSENSITIVE 3-like 3 protein | ||||
Refseq | XP_021308896.1 | 1e-111 | ETHYLENE INSENSITIVE 3-like 3 protein | ||||
Refseq | XP_021308897.1 | 1e-111 | ETHYLENE INSENSITIVE 3-like 3 protein | ||||
Swissprot | O23116 | 2e-59 | EIL3_ARATH; ETHYLENE INSENSITIVE 3-like 3 protein | ||||
TrEMBL | C5X3X3 | 1e-109 | C5X3X3_SORBI; Uncharacterized protein | ||||
STRING | Sb02g028390.1 | 1e-110 | (Sorghum bicolor) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G73730.1 | 8e-57 | ETHYLENE-INSENSITIVE3-like 3 |
Publications ? help Back to Top | |||
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