PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||||||
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TF ID | Sof002067 | ||||||||||||
Organism | |||||||||||||
Taxonomic ID | |||||||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Saccharinae; Saccharum; Saccharum officinarum complex
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Family | bZIP | ||||||||||||
Protein Properties | Length: 331aa MW: 35194.5 Da PI: 5.1044 | ||||||||||||
Description | bZIP family protein | ||||||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 46.8 | 6.4e-15 | 114 | 176 | 1 | 63 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e e kr r+ +NRe+A sRqRKk+++eeLe kvk+++a +L +++ + e a+lk+++ Sof002067 114 EDEAKRRARLVRNRESAHLSRQRKKQYVEELEGKVKAMQATIADLSARISCVTAENAALKQQL 176 6789********************************************************985 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 7.1E-14 | 114 | 178 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 2.5E-13 | 114 | 176 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.151 | 116 | 176 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.0E-13 | 118 | 176 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 5.7E-17 | 118 | 176 | No hit | No description |
CDD | cd14704 | 1.49E-21 | 119 | 170 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 331 aa Download sequence Send to blast |
MAEPALLAPD PFADLPFPEF QAPVDGESFA FEDFDLEDLD LDVDFDLDLF ASDGQLSQPP 60 PLATSSSSAG SPERGSSSSG AGRDGGGLRN EESSESSSRS ASGTDGSGQG KGEEDEAKRR 120 ARLVRNRESA HLSRQRKKQY VEELEGKVKA MQATIADLSA RISCVTAENA ALKQQLGGAA 180 GAVPPPMPMY PAMYPLPMPW MHPAYPMRGS QVPLVPIPRL KPQQSAPAAA EPPAKKARKT 240 KKVASVSLLG FLCLAMLCGC LIPAVNRMYD SVDAGESAAF RPPYHGRVLA VEGPRDNVSD 300 GIDPKHPQSA SETLXALVYL PKNGNMSRIM G |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor involved in endoplasmic reticulum (ER) stress response. Acts as ER stress sensor and activates the transcription factor BZIP50 and the chaperone BIP1. {ECO:0000269|PubMed:22050533}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By dithiothreitol- and tunicamycin-induced endoplasmic reticulum (ER) stress response. {ECO:0000305|PubMed:22050533}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_002461117.2 | 1e-155 | bZIP transcription factor 60 isoform X2 | ||||
Swissprot | Q8LIB3 | 1e-102 | BZP60_ORYSJ; bZIP transcription factor 60 | ||||
TrEMBL | C5X3Z4 | 1e-154 | C5X3Z4_SORBI; Uncharacterized protein | ||||
STRING | Sb02g041070.1 | 1e-155 | (Sorghum bicolor) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56660.1 | 2e-29 | basic region/leucine zipper motif protein 49 |