PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 9042 | ||||||||
Common Name | SELMODRAFT_430854 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Lycopodiidae; Selaginellales; Selaginellaceae; Selaginella
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Family | Dof | ||||||||
Protein Properties | Length: 52aa MW: 6124.82 Da PI: 9.8277 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 54.7 | 2.1e-17 | 2 | 52 | 3 | 49 |
zf-Dof 3 ekalkcprCdstntkfCyynnysls....qPryfCkaCrryWtkGGalrnv 49 ++ +cprC+s nt+f yynn + qPry C++C+ Wt+GG +r v 9042 2 DNVYQCPRCQSYNTRFDYYNNEKSTgkrdQPRYACRSCKGKWTQGGKVRAV 52 67789****************86533444*******************986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD007478 | 6.0E-8 | 1 | 52 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 2.8E-24 | 2 | 52 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 15.417 | 5 | 52 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 52 aa Download sequence Send to blast |
PDNVYQCPRC QSYNTRFDYY NNEKSTGKRD QPRYACRSCK GKWTQGGKVR AV |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_002992665.1 | 3e-31 | uncharacterized protein LOC9630524 | ||||
TrEMBL | D8TAR0 | 7e-30 | D8TAR0_SELML; Uncharacterized protein | ||||
TrEMBL | D8TAS0 | 2e-30 | D8TAS0_SELML; Uncharacterized protein (Fragment) | ||||
STRING | EFJ06250 | 1e-30 | (Selaginella moellendorffii) | ||||
STRING | EFJ06280 | 3e-31 | (Selaginella moellendorffii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP38 | 17 | 445 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46590.1 | 5e-13 | Dof family protein |
Link Out ? help Back to Top | |
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Phytozome | 9042 |
Entrez Gene | 9630524 |
Publications ? help Back to Top | |||
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