PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 449238 | ||||||||
Common Name | SELMODRAFT_449238 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Lycopodiidae; Selaginellales; Selaginellaceae; Selaginella
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Family | EIL | ||||||||
Protein Properties | Length: 276aa MW: 30695.3 Da PI: 10.533 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 242.9 | 1.7e-74 | 15 | 164 | 123 | 273 |
XXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHH CS EIN3 123 sslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglskdqgtppykkphdlkkawkvsvLtavikhmsptieeir 225 ++ +++ ++h+l+elqDTtlgSLLsalmqhcdppqrr+plekgv+pPWWP+G+e+ww+elgl++ qg+ppykkphdlkk+wkv+v tavi+hmsp+i +ir 449238 15 AGQLSAAAPTPHTLQELQDTTLGSLLSALMQHCDPPQRRYPLEKGVAPPWWPSGDEEWWPELGLPNGQGPPPYKKPHDLKKVWKVGVVTAVIRHMSPDIGKIR 117 4444558899********************************************************************************************* PP HTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXXXXXXXXXX CS EIN3 226 elerqskylqdkmsakesfallsvlnqeekecatvsahssslrkqspk 273 +l+rqsk+lqdkm+akes++++svlnqee+++++ s + + q++k 449238 118 KLVRQSKCLQDKMTAKESATWISVLNQEEALARQCSGNLIGQQ-QQQK 164 ********************************99988743222.2222 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.3180.10 | 6.6E-75 | 20 | 153 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
Pfam | PF04873 | 6.4E-68 | 21 | 146 | No hit | No description |
SuperFamily | SSF116768 | 1.96E-62 | 25 | 150 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 276 aa Download sequence Send to blast |
MAKYEGICSR SGGGAGQLSA AAPTPHTLQE LQDTTLGSLL SALMQHCDPP QRRYPLEKGV 60 APPWWPSGDE EWWPELGLPN GQGPPPYKKP HDLKKVWKVG VVTAVIRHMS PDIGKIRKLV 120 RQSKCLQDKM TAKESATWIS VLNQEEALAR QCSGNLIGQQ QQQKLVRQSK MAYLMRVYYE 180 IHETWLDGYV GRPLVLVIVQ NKVTSGSKAR IRHTQVGTTG IKLISSNGEQ MEGEKTRRSL 240 TSSRDLKPTT TPKRRLPNLP KSAARRNDKV RESSS* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
4zds_A | 2e-79 | 24 | 151 | 2 | 129 | Protein ETHYLENE INSENSITIVE 3 |
4zds_B | 2e-79 | 24 | 151 | 2 | 129 | Protein ETHYLENE INSENSITIVE 3 |
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Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor acting as a positive regulator in the ethylene response pathway. Could bind the primary ethylene response element present in the ETHYLENE-RESPONSE-FACTOR1 promoter. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AC158181 | 0.0 | Selaginella moellendorffii clone JGIASXY-5D1, complete sequence |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024522364.1 | 1e-105 | uncharacterized protein LOC112343333 | ||||
Refseq | XP_024540650.1 | 1e-105 | uncharacterized protein LOC112349801 | ||||
Swissprot | Q9SLH0 | 7e-84 | EIL1_ARATH; ETHYLENE INSENSITIVE 3-like 1 protein | ||||
TrEMBL | D8TE11 | 0.0 | D8TE11_SELML; Uncharacterized protein | ||||
STRING | EFJ05124 | 0.0 | (Selaginella moellendorffii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP563 | 16 | 82 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G27050.1 | 2e-82 | ETHYLENE-INSENSITIVE3-like 1 |
Link Out ? help Back to Top | |
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Phytozome | 449238 |
Entrez Gene | 9638749 |