PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 112063 | ||||||||
Common Name | SELMODRAFT_112063, SELMODRAFT_136229 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Lycopodiidae; Selaginellales; Selaginellaceae; Selaginella
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Family | EIL | ||||||||
Protein Properties | Length: 250aa MW: 28316.9 Da PI: 10.535 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 422.8 | 3.5e-129 | 4 | 250 | 1 | 249 |
XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWWkekvefdr 103 +el+kr w d+ +lkr+k+++k + + k+++s+eqarrkkmsraQDgiLkYMlk+mevc+aqGfvYgiipekgkpv+gasd++raWWkekv+fdr 112063 4 DELEKRIWNDRLRLKRIKDKQKARNLGNL-----PKHKQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVSGASDNIRAWWKEKVRFDR 101 79******************998665555.....5899***************************************************************** PP XXXXXXXXXXXXXXXXXXXXXX.......XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT--.-----GGG--H CS EIN3 104 ngpaaiskyqaknlilsgessl...qtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglskdqgtppykkphdlkk 203 ngpaai+ky+a++ i s++ + +++ ++h+l+elqDTtlgSLLsalmqhcdppqrr+plekgv+pPWWP+G+e+ww+elgl+k qg+ppykkphdlkk 112063 102 NGPAAIAKYEAEHGICSRSGGGagqLSAAAPTPHTLQELQDTTLGSLLSALMQHCDPPQRRYPLEKGVAPPWWPSGDEEWWPELGLPKGQGPPPYKKPHDLKK 204 ***************9876554221356889************************************************************************ PP HHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHH CS EIN3 204 awkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsv 249 +wkv+vLtavi+hmsp+i +ir+l+rqsk+lqdkm+akes++++sv 112063 205 VWKVGVLTAVIRHMSPDIGKIRKLVRQSKCLQDKMTAKESATWISV 250 *******************************************986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04873 | 5.1E-125 | 4 | 249 | No hit | No description |
Gene3D | G3DSA:1.10.3180.10 | 3.5E-70 | 129 | 250 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
SuperFamily | SSF116768 | 2.75E-59 | 134 | 249 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009723 | Biological Process | response to ethylene | ||||
GO:0042742 | Biological Process | defense response to bacterium | ||||
GO:0071281 | Biological Process | cellular response to iron ion | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 250 aa Download sequence Send to blast |
MDVDELEKRI WNDRLRLKRI KDKQKARNLG NLPKHKQSQE QARRKKMSRA QDGILKYMLK 60 MMEVCKAQGF VYGIIPEKGK PVSGASDNIR AWWKEKVRFD RNGPAAIAKY EAEHGICSRS 120 GGGAGQLSAA APTPHTLQEL QDTTLGSLLS ALMQHCDPPQ RRYPLEKGVA PPWWPSGDEE 180 WWPELGLPKG QGPPPYKKPH DLKKVWKVGV LTAVIRHMSP DIGKIRKLVR QSKCLQDKMT 240 AKESATWISV |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
4zds_A | 2e-73 | 133 | 250 | 2 | 119 | Protein ETHYLENE INSENSITIVE 3 |
4zds_B | 2e-73 | 133 | 250 | 2 | 119 | Protein ETHYLENE INSENSITIVE 3 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor acting as a positive regulator in the ethylene response pathway. Could bind the primary ethylene response element present in the ETHYLENE-RESPONSE-FACTOR1 promoter. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AC158181 | 0.0 | Selaginella moellendorffii clone JGIASXY-5D1, complete sequence |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024540650.1 | 1e-172 | uncharacterized protein LOC112349801 | ||||
Swissprot | Q9SLH0 | 1e-145 | EIL1_ARATH; ETHYLENE INSENSITIVE 3-like 1 protein | ||||
TrEMBL | D8S9Y3 | 0.0 | D8S9Y3_SELML; Uncharacterized protein (Fragment) | ||||
STRING | EFJ05988 | 0.0 | (Selaginella moellendorffii) | ||||
STRING | EFJ19031 | 0.0 | (Selaginella moellendorffii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP563 | 16 | 82 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G27050.1 | 1e-129 | ETHYLENE-INSENSITIVE3-like 1 |
Link Out ? help Back to Top | |
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Phytozome | 112063 |
Entrez Gene | 9646152 | 9647031 |