PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SMil_00025719-RA_Salv | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
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Family | WRKY | ||||||||
Protein Properties | Length: 148aa MW: 17090.3 Da PI: 8.9622 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 35.3 | 2.3e-11 | 112 | 133 | 1 | 22 |
---SS-EEEEEEE--TT-SS-E CS WRKY 1 ldDgynWrKYGqKevkgsefpr 22 +dDgy+WrKYG+K+vk+s++pr SMil_00025719-RA_Salv 112 MDDGYKWRKYGKKMVKNSPNPR 133 69*******************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 4.5E-11 | 100 | 133 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 2.22E-9 | 105 | 134 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 12.53 | 107 | 133 | IPR003657 | WRKY domain |
SMART | SM00774 | 5.8E-4 | 112 | 144 | IPR003657 | WRKY domain |
Pfam | PF03106 | 5.2E-7 | 113 | 135 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 148 aa Download sequence Send to blast |
MLKLKSTINT TPQSHQNPNS PSLNCDHDLS LFGNQLNDPL YFNIANYLMF DEDFGSNDNN 60 ISCEKSVVDC PNGSFTSVPF ANNIKPRRVV NKYKAQDDCR FAFRTKTQLE VMDDGYKWRK 120 YGKKMVKNSP NPRPAHLFIN YCKIDRNL |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020554654.1 | 2e-24 | probable WRKY transcription factor 51 | ||||
TrEMBL | A0A4D8YZR2 | 2e-71 | A0A4D8YZR2_SALSN; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2124 | 24 | 62 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G26170.1 | 5e-15 | WRKY DNA-binding protein 50 |