PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SMil_00022386-RA_Salv | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
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Family | bHLH | ||||||||
Protein Properties | Length: 231aa MW: 25974.1 Da PI: 10.7616 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 11.8 | 0.00044 | 14 | 55 | 5 | 32 |
HHHHHHHHHHHHHHHHHHHHCTSCCC................ CS HLH 5 hnerErrRRdriNsafeeLrellPkas..............k 32 + +E++RR r++ ++L +++P + + SMil_00022386-RA_Salv 14 RKTIEKNRRIRMKALGFKLVSIIPDRHltqpkggkraepnrA 55 5789********************965576666666555540 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:4.10.280.10 | 1.6E-5 | 13 | 37 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 1.6E-5 | 86 | 125 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 231 aa Download sequence Send to blast |
MKRSEMNSKN KLERKTIEKN RRIRMKALGF KLVSIIPDRH LTQPKGGKRA EPNRAKPNTS 60 RLELGSFKYS GVRARLELDS SFYLVDRARL EFLTHLDQID EAAAYIKTMR ERIDGLKRRK 120 AQLLMNSGAT ECVAKTAAED CSGSELPILT VRALGHGVEV MLVSGQRKNF MLSQVISVIE 180 EEAAQVLSVN ISRVGDNVVH TLHAQVKISR VGVDTSRISD RLHEMISSRA H |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A4D9A3E4 | 6e-77 | A0A4D9A3E4_SALSN; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA6083 | 14 | 23 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G10586.1 | 2e-18 | bHLH family protein |