PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SMil_00021820-RA_Salv | ||||||||
Common Name | WRKY7 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
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Family | WRKY | ||||||||
Protein Properties | Length: 264aa MW: 29889.3 Da PI: 6.6428 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 78.2 | 9.1e-25 | 124 | 184 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK++ ++++pr+YYrCt++ +C ++k+v++ +++p + +tY+g+H+++ SMil_00021820-RA_Salv 124 EDGHAWRKYGQKSILNAKHPRNYYRCTHKfdqKCLATKQVQKIQDEPPLYRTTYNGQHTCN 184 7***************************9999***************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 4.6E-26 | 108 | 185 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 20.312 | 118 | 186 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 1.96E-24 | 120 | 185 | IPR003657 | WRKY domain |
SMART | SM00774 | 1.1E-36 | 123 | 185 | IPR003657 | WRKY domain |
Pfam | PF03106 | 4.2E-24 | 124 | 183 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009862 | Biological Process | systemic acquired resistance, salicylic acid mediated signaling pathway | ||||
GO:0009864 | Biological Process | induced systemic resistance, jasmonic acid mediated signaling pathway | ||||
GO:0010200 | Biological Process | response to chitin | ||||
GO:0045892 | Biological Process | negative regulation of transcription, DNA-templated | ||||
GO:0050832 | Biological Process | defense response to fungus | ||||
GO:1900056 | Biological Process | negative regulation of leaf senescence | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 264 aa Download sequence Send to blast |
LSMASSSCVH RNAVPERVMT ELTRGREIAD RIRLMLRETG FDGSAGSVFP VQSLVSQLLD 60 TFTHSLAMLR DGGESDEASQ ALSAAKLEDS GDSCKTPAAK DRRGCYKRKK SSETRIKESS 120 DLFEDGHAWR KYGQKSILNA KHPRNYYRCT HKFDQKCLAT KQVQKIQDEP PLYRTTYNGQ 180 HTCNKSALHH HVVPASPDSS SVMWSFNSIK QEEEIQMKTP DEYYISPHHF SPMSSDVYSC 240 SHSIEDVDDI VGSFEDYFEF ETLS |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6ir8_A | 2e-23 | 123 | 183 | 8 | 68 | OsWRKY45 |
Search in ModeBase |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00408 | DAP | Transfer from AT3G56400 | Download |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | KM823130 | 0.0 | KM823130.1 Salvia miltiorrhiza WRKY protein (WRKY7) mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012832290.1 | 6e-80 | PREDICTED: probable WRKY transcription factor 70 | ||||
TrEMBL | A0A0D5YAC5 | 0.0 | A0A0D5YAC5_SALMI; WRKY protein | ||||
STRING | Migut.J00031.1.p | 2e-79 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA4230 | 21 | 43 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56400.1 | 4e-42 | WRKY DNA-binding protein 70 |