 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
SMil_00016848-RA_Salv |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
|
| Family |
bHLH |
| Protein Properties |
Length: 145aa MW: 16333.8 Da PI: 8.8776 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| SMil_00016848-RA_Salv | genome | NDCTCM | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 21.4 | 4.7e-07 | 104 | 130 | 4 | 30 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC CS
HLH 4 ahnerErrRRdriNsafeeLrellPka 30
+h+ +Er RR++i +++ L++l+P +
SMil_00016848-RA_Salv 104 SHSLAERARREKISERMKILQDLVPGC 130
8************************86 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 145 aa
Download sequence Send
to blast |
MAPARLAAAA CEVGEANAIW HRHRWGWVQR LRKPHRLCIS LSPSLSLTPS KDNEKAEELT 60
FGGSTLGHSN SENCIQSFLL LFLDELPKQD YIHVRARRGQ ATDSHSLAER ARREKISERM 120
KILQDLVPGC NKVSCRLCLD IFVAS
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor that forms a ternary complex with RSS3 and TIFY11A/JAZ9 to negatively regulate jasmonate-responsive genes. {ECO:0000269|PubMed:23715469}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | KP257469 | 0.0 | KP257469.1 Salvia miltiorrhiza clone 36 basic helix-loop-helix transcription factor mRNA, complete cds. |
