PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SMil_00014654-RA_Salv | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
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Family | NAC | ||||||||
Protein Properties | Length: 236aa MW: 27026.7 Da PI: 7.1135 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 143.8 | 9.5e-45 | 20 | 144 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 pGfrFhPt+eel+++yL++ ++g+kl+ ++i ++iyk++P +Lp ++ ++e+ewyfF++rd+k+ r+nr+t++g+Wkatg+ SMil_00014654-RA_Salv 20 PGFRFHPTEEELLDFYLRRMLAGNKLHG-DIIGFLNIYKHHPTELPgLaRI-NGEREWYFFVPRDRKH---GRPNRTTENGFWKATGS 102 9*************************99.99***************53244.5689**********97...59*************** PP NAM 89 dkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 dk++l++ +++ g+kktLvfy+grap+g+ktdWvm+eyr+ SMil_00014654-RA_Salv 103 DKKILTSsdPRKALGVKKTLVFYEGRAPRGRKTDWVMNEYRM 144 *****98766778***************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 52.041 | 18 | 162 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 1.28E-51 | 18 | 162 | IPR003441 | NAC domain |
Pfam | PF02365 | 5.8E-26 | 20 | 144 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 236 aa Download sequence Send to blast |
MMDESSSSSS PSSSHGVELP GFRFHPTEEE LLDFYLRRML AGNKLHGDII GFLNIYKHHP 60 TELPGLARIN GEREWYFFVP RDRKHGRPNR TTENGFWKAT GSDKKILTSS DPRKALGVKK 120 TLVFYEGRAP RGRKTDWVMN EYRMPDACTL PQEIVLCKVY RKATSLKVLE QRAAMEEEMM 180 AYISPTPSSE YSMSFSDFED VKFSGGGQGW SCTTALNMDW NQDTLWPLDT TFMPLC |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 7e-41 | 20 | 162 | 17 | 168 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269|PubMed:26834774}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269|PubMed:26834774}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011092943.1 | 8e-98 | NAC domain-containing protein 35-like | ||||
Swissprot | Q10S65 | 2e-79 | NAC22_ORYSJ; NAC domain-containing protein 22 | ||||
TrEMBL | A0A2G9GYZ2 | 1e-104 | A0A2G9GYZ2_9LAMI; Uncharacterized protein | ||||
STRING | GLYMA11G10230.1 | 7e-93 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA3531 | 22 | 48 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G17040.1 | 5e-85 | NAC domain containing protein 36 |
Publications ? help Back to Top | |||
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