PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

SMil_00012605-RA_Salv

Organism

Salvia miltiorrhiza

Taxonomic ID

226208

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia

Family

Nin-like

Protein Properties

Length: 299aa MW: 34094.6 Da PI: 4.3889

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
SMil_00012605-RA_Salv	genome	NDCTCM	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	39.9	8.4e-13	152	185	2	35
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKri 35 +k+++ +++s+yF++pi++AA+eL+v+lT+LK++ SMil_00012605-RA_Salv 152 SKKLTRQMISQYFYMPITQAARELNVGLTLLKKR 185 689*****************************96 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF02042	1.3E-8	155	185	IPR003035	RWP-RK domain

Sequence ? help Back to Top
Protein Sequence Length: 299 aa Download sequence Send to blast
MEITESLNMG WSKYNQALAT IPKEDYDDVF SIPSQLPPLD LRCGILGFHG YEFGMEETVV 60 GAVPNLSSDL CLNDPFYPHC KTLVPEVTLS DSGSVFLDDG MQQVQTEAQK LLLLDYNING 120 ATINDDKLLI IGEDKRGIKR SLEEEEDGTK TSKKLTRQMI SQYFYMPITQ AARELNVGLT 180 LLKKRWSDFL RQEFGKEEGE GKLQESLEIL EQEKKLMEEI PDLQLEDKTK RLRQAFFKAN 240 YKKRKLMGRI DSSSKSVAPT SGCDVALPDQ NAANFCRQAE IIDYDDEDDE FKYFFSDCL

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011071711.1	6e-69	uncharacterized protein LOC105157108
TrEMBL	A0A4D8ZXU0	1e-120	A0A4D8ZXU0_SALSN; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA4274	21	42

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G18790.1	5e-29	RWP-RK domain-containing protein