PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SMil_00009035-RA_Salv
Organism
Salvia miltiorrhiza
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
Family bZIP
Protein Properties Length: 441aa    MW: 47235.3 Da    PI: 10.0107
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SMil_00009035-RA_SalvgenomeNDCTCMView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_139.81e-12363413555
                            CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 
                            +r rr++kNRe+A rsR+RK+a++ eLe +v++L + N +L+   ee  ++
  SMil_00009035-RA_Salv 363 RRRRRMIKNRESAARSRARKQAYTLELEAEVANLRELNCELRRSQEEFMEM 413
                            689************************************999888877776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003389.3E-10359424IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.254361412IPR004827Basic-leucine zipper domain
PfamPF001708.1E-11363415IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.49E-9363411No hitNo description
Gene3DG3DSA:1.20.5.1705.3E-12363412No hitNo description
PROSITE patternPS000360366381IPR004827Basic-leucine zipper domain
CDDcd147071.55E-22368417No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009414Biological Processresponse to water deprivation
GO:0009651Biological Processresponse to salt stress
GO:0009738Biological Processabscisic acid-activated signaling pathway
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0000976Molecular Functiontranscription regulatory region sequence-specific DNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 441 aa     Download sequence    Send to blast
MMMNLITAAG STACILGTMG SYMNFKNFGD TVQQDGSGGK AAGNYRLVRQ SSVYSLTFEE  60
FQNTLGGSGK EFGSMNMEDL LKSIWTAEES QAVVASCTGG GDGSMPGGNL QRQGSLTLPR  120
TLSQKTVDEV WKDVLKESVA PKPASSSGGL NMGPRQPTLG EMTLEEFLAL AGVVREDTHP  180
PGKVNGTGFY GGLPPSNGNN STQSIGFQQP PQSHGLLGNQ LAEQTNIVLN PPSLGINMSV  240
VTSLQQQTQP QLQPLFPKQT TLAFSSPTQL RTNAQLPSSG TKGAVVEMKN ALSNTRVPPG  300
GSVVLGGLSN GAIVGTGSPG NNLYGDVKNN AGTPSSASPS PYNFGENRGG RRSSATLEKV  360
VERRRRRMIK NRESAARSRA RKQAYTLELE AEVANLRELN CELRRSQEEF MEMQKNQILE  420
TMNKPWGGKK KCLRRTLTGP W
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00038PBMTransfer from AT4G34000Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011088250.10.0bZIP transcription factor 23-like
RefseqXP_011088251.10.0bZIP transcription factor 23-like
RefseqXP_011088252.10.0bZIP transcription factor 23-like
TrEMBLA0A2U9Q8N80.0A0A2U9Q8N8_SALMI; ABA-responsive element (ABRE)-binding transcription factor1
STRINGMigut.B00355.1.p1e-156(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA7762497
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G45249.18e-80abscisic acid responsive elements-binding factor 2