PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SMil_00006948-RA_Salv | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
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Family | WRKY | ||||||||
Protein Properties | Length: 224aa MW: 24969.4 Da PI: 6.5247 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 32 | 2.5e-10 | 190 | 211 | 2 | 23 |
--SS-EEEEEEE--TT-SS-EE CS WRKY 2 dDgynWrKYGqKevkgsefprs 23 +Dg++WrKYGqKe+ gs++pr SMil_00006948-RA_Salv 190 EDGFTWRKYGQKEILGSKYPRY 211 7*******************95 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 3.1E-8 | 188 | 213 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 1.29E-7 | 188 | 212 | IPR003657 | WRKY domain |
SMART | SM00774 | 4.6E-4 | 189 | 221 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 9.397 | 190 | 213 | IPR003657 | WRKY domain |
Pfam | PF03106 | 1.5E-7 | 190 | 214 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 224 aa Download sequence Send to blast |
MEEDLILYGC KLAKEMEQNL PMLANQPEAL LASCEEIITI FNNVKERLIV SQGNMMSFHG 60 RGGAGIQEWL RTASGSLTPA TSATTSVARE PMDLLSAQAM LRDPSNFHDG AKMKGLLEQQ 120 QSSSGLDFML GGERDISRVG AIDEVHPKTN APDFIKTSPP RHQRRRKEEG GKYVTTVAAP 180 QMGNLDIPPE DGFTWRKYGQ KEILGSKYPR YIFIYQFSQS PNLF |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | KM823168 | 0.0 | KM823168.1 Salvia miltiorrhiza WRKY protein (WRKY45) mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A0D5YA18 | 1e-153 | A0A0D5YA18_SALMI; WRKY protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA9280 | 18 | 24 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40740.1 | 1e-24 | WRKY DNA-binding protein 55 |