PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SMil_00004511-RA_Salv | ||||||||
Common Name | WRKY58 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
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Family | WRKY | ||||||||
Protein Properties | Length: 260aa MW: 28893.3 Da PI: 7.4413 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 58.9 | 1e-18 | 120 | 157 | 1 | 37 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEE CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkk 37 ++Dgy+WrKYGqK+ ++++ pr+YY+C+ + +Cpvkkk SMil_00004511-RA_Salv 120 VKDGYQWRKYGQKVTRDNPSPRAYYKCSLSpSCPVKKK 157 58**************************999******8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 1.6E-17 | 114 | 157 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 17.442 | 115 | 156 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 5.36E-16 | 117 | 161 | IPR003657 | WRKY domain |
SMART | SM00774 | 1.6E-10 | 120 | 169 | IPR003657 | WRKY domain |
Pfam | PF03106 | 1.1E-14 | 121 | 157 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 260 aa Download sequence Send to blast |
MEKTSLQFID LNSKPMHNPS ETSHDELIQE LSRMKWENKK LNEILAVVCR NYHDFTKIDC 60 VEELYASRKR KSDQLQSSGH IFRGCCGGGE CSPPGRPREI KSNTSRVHVR IDPSDTSLVV 120 KDGYQWRKYG QKVTRDNPSP RAYYKCSLSP SCPVKKKSRF TRAAQPHPSG AEIPATTATA 180 AAEAPAAAAN SPYLSDPTIC SRIENEESEI QQVLVEQMAS SLTRNHSFTA ALVAAITGRI 240 LDDGSEENDD SYSISRVISE |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 66 | 71 | SRKRKS |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | KM823181 | 0.0 | KM823181.1 Salvia miltiorrhiza WRKY protein (WRKY58) mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011081961.1 | 1e-78 | probable WRKY transcription factor 40 | ||||
TrEMBL | A0A0D5Y9D3 | 1e-167 | A0A0D5Y9D3_SALMI; WRKY protein | ||||
STRING | Migut.E01464.1.p | 5e-66 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA4500 | 22 | 42 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G80840.1 | 1e-39 | WRKY DNA-binding protein 40 |