PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SMil_00003594-RA_Salv | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
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Family | TCP | ||||||||
Protein Properties | Length: 181aa MW: 19546.6 Da PI: 10.006 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 24.6 | 8.2e-08 | 112 | 144 | 41 | 73 |
TCP 41 fdkdsktieWLlqqakpaikeltgtssssasec 73 + +d++ ieWL++qa+p+i++ tg ++ +a++ SMil_00003594-RA_Salv 112 HRTDGEIIEWLIRQAEPSIIATTGIDTVPAEAI 144 789*********************988888544 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF14223 | 1.1E-8 | 1 | 63 | No hit | No description |
Pfam | PF03634 | 1.3E-4 | 112 | 143 | IPR005333 | Transcription factor, TCP |
Sequence ? help Back to Top |
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Protein Sequence Length: 181 aa Download sequence Send to blast |
MSEGRSVHEH VMHMTNLFEK LDLVGGSIDG EVKVDIIINS FSKSFENTVI SKKNYTLNKL 60 LNALVTTKGV LGKGAQVLVS ADGPSFSLKG VKKKKGPWGK KGKQNTHSRT RHRTDGEIIE 120 WLIRQAEPSI IATTGIDTVP AEAISTFSGS LLLSPDAATM GLACLLCPLP RRAAGWIYAN 180 C |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72010.1 | 3e-10 | TCP family protein |