PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SMil_00002208-RA_Salv
Common NameWRKY44
Organism
Salvia miltiorrhiza
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
Family WRKY
Protein Properties Length: 265aa    MW: 28206.1 Da    PI: 5.8118
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SMil_00002208-RA_SalvgenomeNDCTCMView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY100.69.6e-32174230258
                            --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS
                   WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58 
                            +Dgy+WrKYGqK vk+s+fprsYYrCt ++C+vkk+vers edp+vv++tYeg+H h
  SMil_00002208-RA_Salv 174 EDGYRWRKYGQKAVKNSPFPRSYYRCTNTKCRVKKRVERSWEDPSVVITTYEGQHCH 230
                            8******************************************************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.4E-32158231IPR003657WRKY domain
SuperFamilySSF1182907.72E-28165231IPR003657WRKY domain
PROSITE profilePS5081129.011168233IPR003657WRKY domain
SMARTSM007741.1E-37173232IPR003657WRKY domain
PfamPF031067.3E-25174230IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    Send to blast
MDGKDTMDSE LSWGFGGGGE SESRSSYLFG GDCKDISSIL SEFGWNIPAD SCGVFGCERG  60
FADFDRIDSD LAGDAADSRA AAGASAPPRD DGTCRSSGEA MAEESSMSAS VLASNPSVSS  120
SSSDDLSAAS GSSAAAAAPN PPPDTASKAK KQGQKRIREP RFAFVTKSEI DHLEDGYRWR  180
KYGQKAVKNS PFPRSYYRCT NTKCRVKKRV ERSWEDPSVV ITTYEGQHCH YSAGFPRGGG  240
ILPPPPPQPR QGLLGDIVPP AMRNG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A3e-251662301074Probable WRKY transcription factor 4
2lex_A3e-251662301074Probable WRKY transcription factor 4
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}.
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKM8231670.0KM823167.1 Salvia miltiorrhiza WRKY protein (WRKY44) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011070956.12e-80probable WRKY transcription factor 57 isoform X2
SwissprotQ9C9833e-63WRK57_ARATH; Probable WRKY transcription factor 57
TrEMBLA0A0D5YA300.0A0A0D5YA30_SALMI; WRKY protein
STRINGXP_009610330.16e-76(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA80312228
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69310.21e-49WRKY DNA-binding protein 57
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Jiang Y,Qiu Y,Hu Y,Yu D
    Heterologous Expression of AtWRKY57 Confers Drought Tolerance in Oryza sativa.
    Front Plant Sci, 2016. 7: p. 145
    [PMID:26904091]
  3. Jiang Y,Yu D
    The WRKY57 Transcription Factor Affects the Expression of Jasmonate ZIM-Domain Genes Transcriptionally to Compromise Botrytis cinerea Resistance.
    Plant Physiol., 2016. 171(4): p. 2771-82
    [PMID:27268959]
  4. Huang KC,Lin WC,Cheng WH
    Salt hypersensitive mutant 9, a nucleolar APUM23 protein, is essential for salt sensitivity in association with the ABA signaling pathway in Arabidopsis.
    BMC Plant Biol., 2018. 18(1): p. 40
    [PMID:29490615]