PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sme2.5_03121.1_g00005.1
Organism
Solanum melongena
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
Family SAP
Protein Properties Length: 437aa    MW: 49202.5 Da    PI: 6.4601
Description SAP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sme2.5_03121.1_g00005.1genomeEGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SAP709.34.1e-216643728455
                      SAP  28 esegpsssrqraanevwpePflealatqvaidasrslGrlaaasalanvfqvcstwravsrsdllwqrltrriWrrtkllrdtWre 113
                              +  ++s+sr+ra n+vwpePfle la  va+dasrslGrlaaa+ala +fqvcstw+avsrsdllwq+ltrriW+r +llr+tWre
  Sme2.5_03121.1_g00005.1   6 SPPSSSRSRRRAGNDVWPEPFLEDLALIVATDASRSLGRLAAAQALALIFQVCSTWQAVSRSDLLWQNLTRRIWNRHELLRQTWRE 91 
                              45578899999*************************************************************************** PP

                      SAP 114 eyiyrhrtarnfrtrrysyvtlqfdpadvd......edndadalsCrclalsdkylaaGfadGavrlfdletrlhvstflpqhrdr 193
                              eyiy+hrta+ f + ry+y tl+f p++ d      ++n++d+l+Cr+lalsd++laaGf++G+v+lf l  rlh+stf+p+hrdr
  Sme2.5_03121.1_g00005.1  92 EYIYWHRTANSFLHHRYTYNTLHFVPTNEDgddddnNNNNNDSLLCRRLALSDHHLAAGFSNGSVQLFFLPRRLHLSTFHPHHRDR 177
                              *************************986541111114467899******************************************* PP

                      SAP 194 lGrfsravsGivisdsrlvfatldGdihvavidgagaaaarrallGdvvndGalvdfaGsgrWwvGlyaGvpGrafhiWdaeteel 279
                              lGrfsravsGi++sd +lvfa+ldGdihv +i    aa++rra+lGdvvndGalvdf+Gs+rWwvGlyaGvpGrafhiW+ eteel
  Sme2.5_03121.1_g00005.1 178 LGRFSRAVSGIILSDVQLVFASLDGDIHVVAIGD--AAPPRRAHLGDVVNDGALVDFTGSDRWWVGLYAGVPGRAFHIWNRETEEL 261
                              *******************************998..78************************************************ PP

                      SAP 280 vfvGGsltdPeavmGWhmlteltelvGrvrvteretavaCtslrlvvfdlrnqgvvlreeeerrGlivssldasneayvvvdsrGv 365
                              vfvGG ltdPea+mGWh+ltel+e+vGr+rvt +etavaCtsl+l+v+dl+n+g+++r + +rrG+iv+ +da+ne++v+vd+rG+
  Sme2.5_03121.1_g00005.1 262 VFVGGELTDPEALMGWHLLTELMEIVGRIRVTTQETAVACTSLQLMVIDLQNPGIIIRAQPSRRGIIVALFDAWNETLVAVDTRGM 347
                              ************************************************************************************** PP

                      SAP 366 atvrrvenleevcrfrvrg.aqrgvlgCvnggyalvyaggvlrvWeiekkegylyslrervgevnalvaddrhvavsssdgtihll 450
                              a+vrrv++lee crf+vrg  qrgv+gC+nggy+l+++g v+rvW+ie+ + ylysl er+g+vna+ ad+r+v ++ssd+tihl+
  Sme2.5_03121.1_g00005.1 348 ANVRRVDDLEERCRFNVRGaNQRGVIGCMNGGYGLMWIGNVIRVWDIEHGV-YLYSLGERIGDVNAITADERYVVACSSDATIHLW 432
                              *******************99****************************88.********************************** PP

                      SAP 451 dfgaq 455
                              dfgaq
  Sme2.5_03121.1_g00005.1 433 DFGAQ 437
                              ***97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.1280.502.4E-44899No hitNo description
SuperFamilySSF813835.89E-750139IPR001810F-box domain
SuperFamilySSF509981.65E-12120435IPR011047Quinoprotein alcohol dehydrogenase-like superfamily
Gene3DG3DSA:2.130.10.101.1E-10130222IPR015943WD40/YVTN repeat-like-containing domain
Gene3DG3DSA:2.130.10.101.1E-10385434IPR015943WD40/YVTN repeat-like-containing domain
PROSITE profilePS5029410.337389437IPR017986WD40-repeat-containing domain
PROSITE profilePS500828.804412437IPR001680WD40 repeat
PROSITE patternPS006780420434IPR019775WD40 repeat, conserved site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009554Biological Processmegasporogenesis
GO:0009908Biological Processflower development
GO:0030163Biological Processprotein catabolic process
GO:0046622Biological Processpositive regulation of organ growth
GO:0005634Cellular Componentnucleus
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 437 aa     Download sequence    Send to blast
MSASSSPPSS SRSRRRAGND VWPEPFLEDL ALIVATDASR SLGRLAAAQA LALIFQVCST  60
WQAVSRSDLL WQNLTRRIWN RHELLRQTWR EEYIYWHRTA NSFLHHRYTY NTLHFVPTNE  120
DGDDDDNNNN NNDSLLCRRL ALSDHHLAAG FSNGSVQLFF LPRRLHLSTF HPHHRDRLGR  180
FSRAVSGIIL SDVQLVFASL DGDIHVVAIG DAAPPRRAHL GDVVNDGALV DFTGSDRWWV  240
GLYAGVPGRA FHIWNRETEE LVFVGGELTD PEALMGWHLL TELMEIVGRI RVTTQETAVA  300
CTSLQLMVID LQNPGIIIRA QPSRRGIIVA LFDAWNETLV AVDTRGMANV RRVDDLEERC  360
RFNVRGANQR GVIGCMNGGY GLMWIGNVIR VWDIEHGVYL YSLGERIGDV NAITADERYV  420
VACSSDATIH LWDFGAQ
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in the specification of floral identity. Acts as A class cadastral protein by repressing the C class floral homeotic gene AGAMOUS in the external flower organs in association with APETALA2 and other repressors. Is required to maintain floral meristem identity in concert with AGAMOUS. Interacts also with APETALA2 to ensure the normal development of ovule.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9755170.0HG975517.1 Solanum lycopersicum chromosome ch05, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006342293.10.0PREDICTED: transcriptional regulator STERILE APETALA-like
SwissprotQ9FKH11e-162SAP_ARATH; Transcriptional regulator STERILE APETALA
TrEMBLA0A1S3ZUZ20.0A0A1S3ZUZ2_TOBAC; transcriptional regulator STERILE APETALA-like
STRINGSolyc05g041220.1.10.0(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA40992345
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G35770.11e-157SAP family protein
Publications ? help Back to Top
  1. Li N, et al.
    STERILE APETALA modulates the stability of a repressor protein complex to control organ size in Arabidopsis thaliana.
    PLoS Genet., 2018. 14(2): p. e1007218
    [PMID:29401459]